RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 CYLC1P35663 651 aaPredicted RBP14.28□□□□□ -0.12
LINC00643-207ENST00000637212 NDST1P52848 882 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 RAD23BP54727 409 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 BMS1Q14692 1282 aaKnown RBP14.28□□□□□ -0.12
LINC00643-207ENST00000637212 PAN2Q504Q3 1202 aaKnown RBP14.28□□□□□ -0.12
LINC00643-207ENST00000637212 TDRD12Q587J7 1177 aaKnown RBP14.28□□□□□ -0.12
LINC00643-207ENST00000637212 WSCD1Q658N2 575 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 ZNF571Q7Z3V5 609 aaPredicted RBP14.28□□□□□ -0.12
LINC00643-207ENST00000637212 SLC47A2Q86VL8 602 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 ADGRF2Q8IZF7 708 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 OR6B3Q8NGW1 331 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 SLC30A5Q8TAD4 765 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 KBTBD7Q8WVZ9 684 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 RABGGTAQ92696 567 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 MRPL45Q9BRJ2 306 aaKnown RBP14.28□□□□□ -0.12
LINC00643-207ENST00000637212 SYT11Q9BT88 431 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 DEF6Q9H4E7 631 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 AAASQ9NRG9 546 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 CXXC1Q9P0U4 656 aaPredicted RBP14.28□□□□□ -0.12
LINC00643-207ENST00000637212 CACNG4Q9UBN1 327 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 STK39Q9UEW8 545 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 NOCTQ9UK39 431 aaKnown RBP14.28□□□□□ -0.12
LINC00643-207ENST00000637212 ADAM28Q9UKQ2 775 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 STXBP5LQ9Y2K9 1186 aa14.28□□□□□ -0.12
LINC00643-207ENST00000637212 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.28□□□□□ -0.12
LINC00643-207ENST00000637212 TTC3P53804 2025 aa14.27□□□□□ -0.12
LINC00643-207ENST00000637212 A8MXQ7 604 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 EIF3CLB5ME19 914 aaKnown RBP14.27□□□□□ -0.13
LINC00643-207ENST00000637212 MED7O43513 233 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 OAZ2O95190 189 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 LCA5LO95447 670 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 VDRP11473 427 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 MAGEA10P43363 369 aaPredicted RBP14.27□□□□□ -0.13
LINC00643-207ENST00000637212 RAP1GAPP47736 663 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 PDE6CP51160 858 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 CDR2Q01850 454 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 C10orf76Q5T2E6 689 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 FAM117BQ6P1L5 589 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 THEM5Q8N1Q8 247 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 SLC4A11Q8NBS3 891 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 SP7Q8TDD2 431 aaPredicted RBP14.27□□□□□ -0.13
LINC00643-207ENST00000637212 EPS8L1Q8TE68 723 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 DDX1Q92499 740 aaKnown RBP14.27□□□□□ -0.13
LINC00643-207ENST00000637212 TNIP3Q96KP6 325 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 HEXIM2Q96MH2 286 aaKnown RBP14.27□□□□□ -0.13
LINC00643-207ENST00000637212 ZNF558Q96NG5 402 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 EIF3CQ99613 913 aaKnown RBP14.27□□□□□ -0.13
LINC00643-207ENST00000637212 ELOVL4Q9GZR5 314 aa14.27□□□□□ -0.13
LINC00643-207ENST00000637212 SF3B1O75533 1304 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC00643-207ENST00000637212 SOWAHDA6NJG2 315 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 AKR1B10O60218 316 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 NDUFA10O95299 355 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 EFEMP2O95967 443 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 PCSK1P29120 753 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 GNA15P30679 374 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 BRCC3P46736 316 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 KRT83P78385 493 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 STILQ15468 1287 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 CNGA2Q16280 664 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 SLC18A3Q16572 532 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 SPOUT1Q5T280 376 aaKnown RBP14.26□□□□□ -0.13
LINC00643-207ENST00000637212 KCNT2Q6UVM3 1135 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 RAD9BQ6WBX8 426 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 TRIM72Q6ZMU5 477 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 TMCO2Q7Z6W1 182 aaPredicted RBP14.26□□□□□ -0.13
LINC00643-207ENST00000637212 NOP9Q86U38 636 aaKnown RBP14.26□□□□□ -0.13
LINC00643-207ENST00000637212 FIBCD1Q8N539 461 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 ZNF606Q8WXB4 792 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 ACBD6Q9BR61 282 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC00643-207ENST00000637212 OXCT2Q9BYC2 517 aaPredicted RBP14.26□□□□□ -0.13
LINC00643-207ENST00000637212 MARCH5Q9NX47 278 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 SPG21Q9NZD8 308 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 ADAMTS1Q9UHI8 967 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 PRG3Q9Y2Y8 225 aaPredicted RBP14.26□□□□□ -0.13
LINC00643-207ENST00000637212 MRPL42Q9Y6G3 142 aaKnown RBP14.26□□□□□ -0.13
LINC00643-207ENST00000637212 TET1Q8NFU7 2136 aa14.26□□□□□ -0.13
LINC00643-207ENST00000637212 RALGAPA2Q2PPJ7 1873 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 IPO7O95373 1038 aaKnown RBP14.25□□□□□ -0.13
LINC00643-207ENST00000637212 ITGB1P05556 798 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 PLEKP08567 350 aaPredicted RBP14.25□□□□□ -0.13
LINC00643-207ENST00000637212 GZMAP12544 262 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 CHRNB2P17787 502 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 FGFR3P22607 806 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 LMO2P25791 158 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 PPM1AP35813 382 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 KIF11P52732 1056 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 MRPL58Q14197 206 aaKnown RBP14.25□□□□□ -0.13
LINC00643-207ENST00000637212 SPA17Q15506 151 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 ZNF394Q53GI3 561 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 PPP1R2P3Q6NXS1 205 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.25□□□□□ -0.13
LINC00643-207ENST00000637212 COLGALT1Q8NBJ5 622 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 CLP1Q92989 425 aaKnown RBP14.25□□□□□ -0.13
LINC00643-207ENST00000637212 IGSF21Q96ID5 467 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 TWNKQ96RR1 684 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 LUC7LQ9NQ29 371 aaKnown RBP14.25□□□□□ -0.13
LINC00643-207ENST00000637212 KCND1Q9NSA2 647 aa14.25□□□□□ -0.13
LINC00643-207ENST00000637212 DDX43Q9NXZ2 648 aaKnown RBP14.25□□□□□ -0.13
LINC00643-207ENST00000637212 CDH9Q9ULB4 789 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms