RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 FAM118BQ9BPY3 351 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 TRABDQ9H4I3 376 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 CYP26B1Q9NR63 512 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 DNPEPQ9ULA0 475 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 PCDHB4Q9Y5E5 795 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 DOCK5Q9H7D0 1870 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 COL4A5P29400 1685 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 TCRBV5S1A1TA0A578 114 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 TMEM191CA6NGB0 347 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 ALOX15BO15296 676 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 EDF1O60869 148 aaKnown RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 DCTN3O75935 186 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 TMEM191BP0C7N4 346 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 PECAM1P16284 738 aaPredicted RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 NLRP11P59045 1033 aaKnown RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 SETDB1Q15047 1291 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 OASLQ15646 514 aaKnown RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 RNASEH2BQ5TBB1 312 aaKnown RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 SPOPLQ6IQ16 392 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 TMEM270Q6UE05 265 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 AGGF1Q8N302 714 aaeCLIP15.36■□□□□ 0.05
CLN6-215ENST00000636674 UBR7Q8N806 425 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 PRCCQ92733 491 aaPredicted RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 POLR3FQ9H1D9 316 aaPredicted RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 MYLK2Q9H1R3 596 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 PCDH9Q9HC56 1237 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 AGO2Q9UKV8 859 aaKnown RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 PHTF1Q9UMS5 762 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 MYH9P35579 1960 aaKnown RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 A8MUI8 341 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 TYROBPO43914 113 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 ITGAVP06756 1048 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 IBSPP21815 317 aaPredicted RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 ARSEP51690 589 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 VCPP55072 806 aaKnown RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 ZC3H12AQ5D1E8 599 aaKnown RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 LMBRD2Q68DH5 695 aaPredicted RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 FAM47EQ6ZV65 393 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 PRUNE1Q86TP1 453 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 PASD1Q8IV76 773 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 HOMEZQ8IX15 550 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 GLIS1Q8NBF1 620 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 UTP4Q969X6 686 aaKnown RBP15.36■□□□□ 0.05
CLN6-215ENST00000636674 SMC6Q96SB8 1091 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 CGRRF1Q99675 332 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 ETNK1Q9HBU6 452 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 TRIM33Q9UPN9 1127 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 CHKBQ9Y259 395 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 USTQ9Y2C2 406 aa15.36■□□□□ 0.05
CLN6-215ENST00000636674 DICER1Q9UPY3 1922 aaKnown RBP15.35■□□□□ 0.05
CLN6-215ENST00000636674 LSM8O95777 96 aaKnown RBP15.35■□□□□ 0.05
CLN6-215ENST00000636674 LDHAP00338 332 aaKnown RBP15.35■□□□□ 0.05
CLN6-215ENST00000636674 KRT1P04264 644 aa15.35■□□□□ 0.05
CLN6-215ENST00000636674 CALB1P05937 261 aa15.35■□□□□ 0.05
CLN6-215ENST00000636674 PRKCEQ02156 737 aa15.35■□□□□ 0.05
CLN6-215ENST00000636674 ZNF252P-AS1Q0IIN9 211 aa15.35■□□□□ 0.05
CLN6-215ENST00000636674 EFHC2Q5JST6 749 aa15.35■□□□□ 0.05
CLN6-215ENST00000636674 SLFN12LQ6IEE8 588 aa15.35■□□□□ 0.05
CLN6-215ENST00000636674 MFSD7Q6UXD7 560 aa15.35■□□□□ 0.05
CLN6-215ENST00000636674 SPOCD1Q6ZMY3 1216 aa15.35■□□□□ 0.05
CLN6-215ENST00000636674 NIPA2Q8N8Q9 360 aa15.35■□□□□ 0.05
CLN6-215ENST00000636674 PSMC3IPQ9P2W1 217 aaPredicted RBP15.35■□□□□ 0.05
CLN6-215ENST00000636674 SEPT9Q9UHD8 586 aaPredicted RBP15.35■□□□□ 0.05
CLN6-215ENST00000636674 SUFUQ9UMX1 484 aa15.35■□□□□ 0.05
CLN6-215ENST00000636674 ZNF148Q9UQR1 794 aa15.35■□□□□ 0.05
CLN6-215ENST00000636674 COL11A1P12107 1806 aaPredicted RBP15.35■□□□□ 0.05
CLN6-215ENST00000636674 hCG_1818297A0A087WSY0 165 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 RAD17O75943 681 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 NR3C2P08235 984 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 RPSAP08865 295 aaKnown RBP15.34■□□□□ 0.05
CLN6-215ENST00000636674 ATP2A2P16615 1042 aaKnown RBP15.34■□□□□ 0.05
CLN6-215ENST00000636674 GJC1P36383 396 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 NOP14P78316 857 aaKnown RBP15.34■□□□□ 0.05
CLN6-215ENST00000636674 TAP1Q03518 808 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 DNAJC3Q13217 504 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 PKN2Q16513 984 aaKnown RBP15.34■□□□□ 0.05
CLN6-215ENST00000636674 CENPUQ71F23 418 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 ERICH1Q86X53 443 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 ZNF398Q8TD17 642 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 C10orf82Q8WW14 230 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 ERP27Q96DN0 273 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 LRRC37BQ96QE4 947 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 SLC5A4Q9NY91 659 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 DDX56Q9NY93 547 aaKnown RBP15.34■□□□□ 0.05
CLN6-215ENST00000636674 RBAKQ9NYW8 714 aaPredicted RBP15.34■□□□□ 0.05
CLN6-215ENST00000636674 RPL26L1Q9UNX3 145 aaKnown RBP15.34■□□□□ 0.05
CLN6-215ENST00000636674 STK38LQ9Y2H1 464 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.34■□□□□ 0.05
CLN6-215ENST00000636674 RLFQ13129 1914 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 TRAFD1O14545 582 aaPredicted RBP15.34■□□□□ 0.05
CLN6-215ENST00000636674 ATP2A1O14983 1001 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 SPAG7O75391 227 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 KRT10P13645 584 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 ALDH3A1P30838 453 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 SSR1P43307 286 aaKnown RBP15.34■□□□□ 0.05
CLN6-215ENST00000636674 ADCY1Q08828 1119 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 GPS1Q13098 491 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 FASTKD3Q14CZ7 662 aaKnown RBP15.34■□□□□ 0.05
CLN6-215ENST00000636674 XKR3Q5GH77 459 aa15.34■□□□□ 0.05
CLN6-215ENST00000636674 TFDP3Q5H9I0 405 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms