RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 TAF12Q16514 161 aa20.43■□□□□ 0.86
CLN6-213ENST00000636212 MGAT5BQ3V5L5 792 aa20.43■□□□□ 0.86
CLN6-213ENST00000636212 SLC44A4Q53GD3 710 aa20.43■□□□□ 0.86
CLN6-213ENST00000636212 RESP18Q5W5W9 173 aa20.43■□□□□ 0.86
CLN6-213ENST00000636212 WSCD1Q658N2 575 aa20.43■□□□□ 0.86
CLN6-213ENST00000636212 UNC13DQ70J99 1090 aa20.43■□□□□ 0.86
CLN6-213ENST00000636212 LRRC52Q8N7C0 313 aa20.43■□□□□ 0.86
CLN6-213ENST00000636212 ATAD1Q8NBU5 361 aa20.43■□□□□ 0.86
CLN6-213ENST00000636212 SPPL2BQ8TCT7 592 aa20.43■□□□□ 0.86
CLN6-213ENST00000636212 SEPT5Q99719 369 aaPredicted RBP20.43■□□□□ 0.86
CLN6-213ENST00000636212 ZCWPW1Q9H0M4 648 aa20.43■□□□□ 0.86
CLN6-213ENST00000636212 PDE11AQ9HCR9 933 aa20.43■□□□□ 0.86
CLN6-213ENST00000636212 UBE4BO95155 1302 aa20.43■□□□□ 0.86
CLN6-213ENST00000636212 STARD6P59095 220 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 SNRPFP62306 86 aaKnown RBP20.42■□□□□ 0.86
CLN6-213ENST00000636212 BFSP1Q12934 665 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 MYO1EQ12965 1108 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 ARHGAP15Q53QZ3 475 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 FAM78AQ5JUQ0 283 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 TANGO2Q6ICL3 276 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 HS2ST1Q7LGA3 356 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 C1orf127Q8N9H9 656 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 ZSWIM2Q8NEG5 633 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 OR10T2Q8NGX3 314 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 SMARCD2Q92925 531 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 HPS3Q969F9 1004 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 E2F7Q96AV8 911 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 ASB16Q96NS5 453 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 TMEM209Q96SK2 561 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 BRD9Q9H8M2 597 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 RCOR1Q9UKL0 485 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 NOTCH4Q99466 2003 aa20.42■□□□□ 0.86
CLN6-213ENST00000636212 TCHHQ07283 1943 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.41■□□□□ 0.86
CLN6-213ENST00000636212 PVALEFA0A1B0GWK0 134 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 KANSL1LA0AUZ9 987 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 VNN2O95498 520 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 CCR2P41597 374 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 AFMP43652 599 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 MYL7Q01449 175 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 ANGPT1Q15389 498 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 TEAD2Q15562 447 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 TMEM86AQ8N2M4 240 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 ZNF507Q8TCN5 953 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 PSMG2Q969U7 264 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 GCNAQ96QF7 691 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 PHOX2BQ99453 314 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 TRMT61BQ9BVS5 477 aaKnown RBP20.41■□□□□ 0.86
CLN6-213ENST00000636212 CRISPLD1Q9H336 500 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 HSPBP1Q9NZL4 362 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 ATP6V1DQ9Y5K8 247 aa20.41■□□□□ 0.86
CLN6-213ENST00000636212 A0A1W2PRU2 124 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 GJA1P17302 382 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 TSC2P49815 1807 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 KRT85P78386 507 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 PKP1Q13835 747 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 UBXN2BQ14CS0 331 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 NFE2Q16621 373 aaPredicted RBP20.4■□□□□ 0.86
CLN6-213ENST00000636212 DUOXA2Q1HG44 320 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 DNAJB7Q7Z6W7 309 aaPredicted RBP20.4■□□□□ 0.86
CLN6-213ENST00000636212 GLIS3Q8NEA6 775 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 PJA1Q8NG27 643 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 ZSCAN18Q8TBC5 510 aaPredicted RBP20.4■□□□□ 0.86
CLN6-213ENST00000636212 DEPDC1BQ8WUY9 529 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 DNASE1L2Q92874 299 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 IRF7Q92985 503 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 BORCS6Q96GS4 357 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 MTMR12Q9C0I1 747 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 BLZF1Q9H2G9 400 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 ATXN3LQ9H3M9 355 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 CGNQ9P2M7 1197 aaKnown RBP20.4■□□□□ 0.86
CLN6-213ENST00000636212 MRPS17Q9Y2R5 130 aaKnown RBP20.4■□□□□ 0.86
CLN6-213ENST00000636212 PCDHB5Q9Y5E4 795 aa20.4■□□□□ 0.86
CLN6-213ENST00000636212 NCAM2O15394 837 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 DCNP07585 359 aaKnown RBP20.39■□□□□ 0.85
CLN6-213ENST00000636212 PSMC3P17980 439 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 WNT7BP56706 349 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 GRM2Q14416 872 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 EPM2AIP1Q7L775 607 aaPredicted RBP20.39■□□□□ 0.85
CLN6-213ENST00000636212 NELFCDQ8IXH7 590 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 YAF2Q8IY57 180 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 SHKBP1Q8TBC3 707 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 SPATA18Q8TC71 538 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 SPATA32Q96LK8 384 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 FNBP1Q96RU3 617 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 NELL2Q99435 816 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 BCO2Q9BYV7 579 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 PLA2G2FQ9BZM2 168 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 DNAJC25Q9H1X3 360 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 INTS13Q9NVM9 706 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 ABI2Q9NYB9 513 aaPredicted RBP20.39■□□□□ 0.85
CLN6-213ENST00000636212 SNX9Q9Y5X1 595 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 SCN1AP35498 2009 aa20.39■□□□□ 0.85
CLN6-213ENST00000636212 DPYSL4O14531 572 aa20.38■□□□□ 0.85
CLN6-213ENST00000636212 PRPF40AO75400 957 aaKnown RBP20.38■□□□□ 0.85
CLN6-213ENST00000636212 MOSPD3O75425 235 aa20.38■□□□□ 0.85
CLN6-213ENST00000636212 SLFN14P0C7P3 912 aa20.38■□□□□ 0.85
CLN6-213ENST00000636212 FCARP24071 287 aa20.38■□□□□ 0.85
CLN6-213ENST00000636212 CDC25CP30307 473 aa20.38■□□□□ 0.85
CLN6-213ENST00000636212 LHX1P48742 406 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms