RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 PYGMP11217 842 aa13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 TNNC1P63316 161 aa13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 ZNF211Q13398 564 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 NBPF20Q3BBV1 942 aa13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 PPP1R15BQ5SWA1 713 aa13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 GDF6Q6KF10 455 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 CCDC70Q6NSX1 233 aa13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 APBB1IPQ7Z5R6 666 aaPredicted RBP13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 RPAINQ86UA6 219 aa13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 FAM228AQ86W67 206 aa13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 C1orf131Q8NDD1 294 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 HINFPQ9BQA5 517 aa13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 ERVK-5Q9HDB9 667 aa13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 RNF186Q9NXI6 227 aa13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 CYTH4Q9UIA0 394 aa13.31□□□□□ -0.28
CACNA1A-219ENST00000635917 KRIT1O00522 736 aa13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 PPEF2O14830 753 aa13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 PROSCO94903 275 aa13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 SLC1A1P43005 524 aa13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 PTPN11Q06124 597 aaPredicted RBP13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 CASP8Q14790 479 aa13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 PHLDB2Q86SQ0 1253 aa13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 SESTD1Q86VW0 696 aa13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 UBL4BQ8N7F7 174 aa13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 TMEM35BQ8NCS4 154 aa13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 SMG8Q8ND04 991 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 SEC14L1Q92503 715 aa13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 CELF4Q9BZC1 486 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 DDX47Q9H0S4 455 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 MRPL47Q9HD33 250 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 TUBGCP4Q9UGJ1 667 aa13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 PIN4Q9Y237 131 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 GRIN2DO15399 1336 aa13.3□□□□□ -0.28
CACNA1A-219ENST00000635917 MYO1FO00160 1098 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 SPOPO43791 374 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 TOMM70O94826 608 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 CLSTN1O94985 981 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 HEXIM1O94992 359 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 KCNE1P15382 129 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 CST5P28325 142 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 GSCP56915 257 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 RPL7AP62424 266 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 SP3Q02447 781 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 ZNF252P-AS1Q0IIN9 211 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 SIX1Q15475 284 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 PTPN20Q4JDL3 420 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 MAP3K21Q5TCX8 1036 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 LIN9Q5TKA1 542 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 DENND1BQ6P3S1 775 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 HDXQ7Z353 690 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 SERINC5Q86VE9 423 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 GSPT2Q8IYD1 628 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 C18orf25Q96B23 403 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 DDX27Q96GQ7 796 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 TMEM176AQ96HP8 235 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 SLITRK6Q9H5Y7 841 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 PARVAQ9NVD7 372 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 BARX2Q9UMQ3 279 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 NME7Q9Y5B8 376 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 SCINQ9Y6U3 715 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 TMEM191CA6NGB0 347 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 PIRO00625 290 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 CALB1P05937 261 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 RARBP10826 455 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 P4HA1P13674 534 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 AKAP5P24588 427 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 CCND3P30281 292 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 MAN1A1P33908 653 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 MRPS6P82932 125 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 MGAT3Q09327 533 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 TRADDQ15628 312 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 MAP9Q49MG5 647 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 KLHL7Q8IXQ5 586 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 KRT222Q8N1A0 295 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 LRRC52Q8N7C0 313 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 ARRDC4Q8NCT1 418 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 FEZF2Q8TBJ5 459 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 CAPNS2Q96L46 248 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 TSPAN18Q96SJ8 248 aa13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 NAP1L3Q99457 506 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.29□□□□□ -0.28
CACNA1A-219ENST00000635917 SMIM28A0A1B0GU29 152 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 O00370 1275 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 GJB6O95452 261 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 CHRNA1P02708 482 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 CYP3A5P20815 502 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 ECHS1P30084 290 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 GPD2P43304 727 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 CARSP49589 748 aaKnown RBP13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 RWDD2BP57060 319 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 ORC1Q13415 861 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 CLUL1Q15846 466 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 CNGA2Q16280 664 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 CYP1B1Q16678 543 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 GLRA4Q5JXX5 417 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 C9orf57Q5W0N0 161 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 LIMS2Q7Z4I7 341 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 REM2Q8IYK8 340 aaPredicted RBP13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 PRELID2Q8N945 189 aa13.28□□□□□ -0.28
CACNA1A-219ENST00000635917 EIF1ADQ8N9N8 165 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms