RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 METTL23Q86XA0 190 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 THEM5Q8N1Q8 247 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 TMEM86AQ8N2M4 240 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 OR10T2Q8NGX3 314 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 FEZF2Q8TBJ5 459 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 SPATA18Q8TC71 538 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 SYAP1Q96A49 352 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-210ENST00000635675 APOL5Q9BWW9 433 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 SRRTQ9BXP5 876 aaKnown RBP10.45□□□□□ -0.74
LINC00339-210ENST00000635675 RHOBTB2Q9BYZ6 727 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 SFXN1Q9H9B4 322 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 METTL14Q9HCE5 456 aaKnown RBP10.45□□□□□ -0.74
LINC00339-210ENST00000635675 TMEM8AQ9HCN3 771 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 ARMCX3Q9UH62 379 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-210ENST00000635675 MAFFQ9ULX9 164 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 FAM50BQ9Y247 325 aa10.45□□□□□ -0.74
LINC00339-210ENST00000635675 TCF20Q9UGU0 1960 aaKnown RBP10.45□□□□□ -0.74
LINC00339-210ENST00000635675 CCDC195A0A1B0GUA6 201 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 STX10O60499 249 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 SEC24AO95486 1093 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 VNN2O95498 520 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 ASS1P00966 412 aaKnown RBP10.44□□□□□ -0.74
LINC00339-210ENST00000635675 OR4Q2P0C623 313 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 IL9P15248 144 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 PTMSP20962 102 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 ERCC5P28715 1186 aaPredicted RBP10.44□□□□□ -0.74
LINC00339-210ENST00000635675 SGSM1Q2NKQ1 1148 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 CT47A1Q5JQC4 288 aaPredicted RBP10.44□□□□□ -0.74
LINC00339-210ENST00000635675 CCDC183Q5T5S1 534 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 KRT39Q6A163 491 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 CES5AQ6NT32 575 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 TMC5Q6UXY8 1006 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 CYP26C1Q6V0L0 522 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 RNF19BQ6ZMZ0 732 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 LRRTM3Q86VH5 581 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 OSTM1Q86WC4 334 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 TCEAL8Q8IYN2 117 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 ADGRF2Q8IZF7 708 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 TAS1R2Q8TE23 839 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 KBTBD7Q8WVZ9 684 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 TAF4BQ92750 862 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 SLC35C1Q96A29 364 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 ZNF707Q96C28 371 aaPredicted RBP10.44□□□□□ -0.74
LINC00339-210ENST00000635675 TMEM209Q96SK2 561 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 ZCWPW1Q9H0M4 648 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 ZDHHC7Q9NXF8 308 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 TMEM63CQ9P1W3 806 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 AFF4Q9UHB7 1163 aaKnown RBP10.44□□□□□ -0.74
LINC00339-210ENST00000635675 CDH22Q9UJ99 828 aa10.44□□□□□ -0.74
LINC00339-210ENST00000635675 SPTBN5Q9NRC6 3674 aaKnown RBP10.44□□□□□ -0.74
LINC00339-210ENST00000635675 TACC1O75410 805 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 FGFR1OPO95684 399 aaKnown RBP10.43□□□□□ -0.74
LINC00339-210ENST00000635675 GNA14O95837 355 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 HLA-DRAP01903 254 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 C8AP07357 584 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 HNRNPA1P09651 372 aaKnown RBP eCLIP10.43□□□□□ -0.74
LINC00339-210ENST00000635675 WEE2P0C1S8 567 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 CPB1P15086 417 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 HOXA9P31269 272 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 LHX1P48742 406 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 MARSP56192 900 aaKnown RBP10.43□□□□□ -0.74
LINC00339-210ENST00000635675 ADCY1Q08828 1119 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 CBX2Q14781 532 aaPredicted RBP10.43□□□□□ -0.74
LINC00339-210ENST00000635675 ZNF699Q32M78 642 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 CCDC40Q4G0X9 1142 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 ZNF667Q5HYK9 610 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 ATAT1Q5SQI0 421 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 LIN9Q5TKA1 542 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 CCDC149Q6ZUS6 474 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 IRF2BP1Q8IU81 584 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 SLC7A14Q8TBB6 771 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 ELMO3Q96BJ8 720 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 MMS19Q96T76 1030 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 ACBD6Q9BR61 282 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 MRPL45Q9BRJ2 306 aaKnown RBP10.43□□□□□ -0.74
LINC00339-210ENST00000635675 ANP32EQ9BTT0 268 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 PRKD2Q9BZL6 878 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 MMRN2Q9H8L6 949 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 DDX43Q9NXZ2 648 aaKnown RBP10.43□□□□□ -0.74
LINC00339-210ENST00000635675 NXF1Q9UBU9 619 aaKnown RBP10.43□□□□□ -0.74
LINC00339-210ENST00000635675 DACH1Q9UI36 760 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 POLIQ9UNA4 740 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 COQ4Q9Y3A0 265 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 A0A0C4DFX4 3053 aa10.43□□□□□ -0.74
LINC00339-210ENST00000635675 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 PRRG1O14668 218 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 LRRN2O75325 713 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 POU2F2P09086 479 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 WARSP23381 471 aaKnown RBP10.42□□□□□ -0.74
LINC00339-210ENST00000635675 LMO2P25791 158 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 ELF1P32519 619 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 PIK3CAP42336 1068 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 MTHFRP42898 656 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 MXI1P50539 228 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 TNNC1P63316 161 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 MYL7Q01449 175 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 SMARCB1Q12824 385 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 CBWD6Q4V339 395 aa10.42□□□□□ -0.74
LINC00339-210ENST00000635675 DCAF17Q5H9S7 520 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-210ENST00000635675 CBWD3Q5JTY5 395 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms