RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	PRRC2B	Q5JSZ5	2229 aa	Known RBP	27.88	■■■□□ 2.05
UBE3A-222	ENST00000630907	TRANK1	O15050	2925 aa		27.87	■■■□□ 2.05
UBE3A-222	ENST00000630907	CLASP2	O75122	1294 aa	Known RBP	27.87	■■■□□ 2.05
UBE3A-222	ENST00000630907	TACC1	O75410	805 aa		27.87	■■■□□ 2.05
UBE3A-222	ENST00000630907	ADH1A	P07327	375 aa		27.87	■■■□□ 2.05
UBE3A-222	ENST00000630907	ATP1A3	P13637	1013 aa		27.87	■■■□□ 2.05
UBE3A-222	ENST00000630907	COPB1	P53618	953 aa	Known RBP	27.87	■■■□□ 2.05
UBE3A-222	ENST00000630907	RSPO2	Q6UXX9	243 aa	Predicted RBP	27.87	■■■□□ 2.05
UBE3A-222	ENST00000630907	SCARA5	Q6ZMJ2	495 aa		27.87	■■■□□ 2.05
UBE3A-222	ENST00000630907	GBP6	Q6ZN66	633 aa		27.87	■■■□□ 2.05
UBE3A-222	ENST00000630907	LMO3	Q8TAP4	145 aa		27.87	■■■□□ 2.05
UBE3A-222	ENST00000630907	SMYD3	Q9H7B4	428 aa		27.87	■■■□□ 2.05
UBE3A-222	ENST00000630907	CDY1	Q9Y6F8	540 aa		27.87	■■■□□ 2.05
UBE3A-222	ENST00000630907	GTPBP10	A4D1E9	387 aa	Known RBP	27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	LRRC10B	A6NIK2	292 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	OR6C75	A6NL08	312 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	WARS	P23381	471 aa	Known RBP	27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	OR1D2	P34982	312 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	LHX1	P48742	406 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	HYAL1	Q12794	435 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	LRMP	Q12912	555 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	OSTM1	Q86WC4	334 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	GLYCTK	Q8IVS8	523 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	KBTBD7	Q8WVZ9	684 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	TATDN2	Q93075	761 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	FAXDC2	Q96IV6	333 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	MRPL45	Q9BRJ2	306 aa	Known RBP	27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	CRACR2A	Q9BSW2	395 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	IGFLR1	Q9H665	355 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	GCNT4	Q9P109	453 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	ATG2A	Q2TAZ0	1938 aa		27.86	■■■□□ 2.05
UBE3A-222	ENST00000630907	GABRD	O14764	452 aa		27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	ADAM12	O43184	909 aa		27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	ASPA	P45381	313 aa		27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	SLC8B1	Q6J4K2	584 aa		27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	PPFIBP1	Q86W92	1011 aa		27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	NT5C1B	Q96P26	610 aa		27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	RTP3	Q9BQQ7	232 aa		27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	ANP32E	Q9BTT0	268 aa		27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	INTS2	Q9H0H0	1204 aa	Known RBP	27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	SNX25	Q9H3E2	840 aa		27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	CYP3A43	Q9HB55	503 aa		27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	DDX43	Q9NXZ2	648 aa	Known RBP	27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	CDH23	Q9H251	3354 aa		27.85	■■■□□ 2.05
UBE3A-222	ENST00000630907	GNL1	P36915	607 aa	Predicted RBP	27.84	■■■□□ 2.05
UBE3A-222	ENST00000630907	RAP1GAP	P47736	663 aa		27.84	■■■□□ 2.05
UBE3A-222	ENST00000630907	CDH8	P55286	799 aa		27.84	■■■□□ 2.05
UBE3A-222	ENST00000630907	ARPP19	P56211	112 aa		27.84	■■■□□ 2.05
UBE3A-222	ENST00000630907	RAB33A	Q14088	237 aa		27.84	■■■□□ 2.05
UBE3A-222	ENST00000630907	CCDC85B	Q15834	202 aa	Predicted RBP	27.84	■■■□□ 2.05
UBE3A-222	ENST00000630907	EXOC3L4	Q17RC7	722 aa		27.84	■■■□□ 2.05
UBE3A-222	ENST00000630907	PALB2	Q86YC2	1186 aa		27.84	■■■□□ 2.05
UBE3A-222	ENST00000630907	OR6B3	Q8NGW1	331 aa		27.84	■■■□□ 2.05
UBE3A-222	ENST00000630907	BCO2	Q9BYV7	579 aa		27.84	■■■□□ 2.05
UBE3A-222	ENST00000630907	SDCBP2	Q9H190	292 aa		27.84	■■■□□ 2.05
UBE3A-222	ENST00000630907	FSD2	A1L4K1	749 aa		27.83	■■■□□ 2.05
UBE3A-222	ENST00000630907	WEE2	P0C1S8	567 aa		27.83	■■■□□ 2.05
UBE3A-222	ENST00000630907	GTF2F1	P35269	517 aa	Known RBP eCLIP	27.83	■■■□□ 2.05	6e-11	■■■■■ 42.3
UBE3A-222	ENST00000630907	FKBP15	Q5T1M5	1219 aa		27.83	■■■□□ 2.05
UBE3A-222	ENST00000630907	APTX	Q7Z2E3	356 aa	Known RBP	27.83	■■■□□ 2.05
UBE3A-222	ENST00000630907	OR10T2	Q8NGX3	314 aa		27.83	■■■□□ 2.05
UBE3A-222	ENST00000630907	PPM1E	Q8WY54	764 aa		27.83	■■■□□ 2.05
UBE3A-222	ENST00000630907	ACBD6	Q9BR61	282 aa		27.83	■■■□□ 2.05
UBE3A-222	ENST00000630907	NCK2	O43639	380 aa		27.82	■■■□□ 2.04
UBE3A-222	ENST00000630907	SLC9A1	P19634	815 aa		27.82	■■■□□ 2.04
UBE3A-222	ENST00000630907	PCSK1	P29120	753 aa		27.82	■■■□□ 2.04
UBE3A-222	ENST00000630907	ROR1	Q01973	937 aa		27.82	■■■□□ 2.04
UBE3A-222	ENST00000630907	EFHB	Q8N7U6	833 aa		27.82	■■■□□ 2.04
UBE3A-222	ENST00000630907	RNF214	Q8ND24	703 aa		27.82	■■■□□ 2.04
UBE3A-222	ENST00000630907	SLC22A17	Q8WUG5	538 aa		27.82	■■■□□ 2.04
UBE3A-222	ENST00000630907	STXBP5L	Q9Y2K9	1186 aa		27.82	■■■□□ 2.04
UBE3A-222	ENST00000630907	TSC2	P49815	1807 aa		27.81	■■■□□ 2.04
UBE3A-222	ENST00000630907	GLUD1	P00367	558 aa		27.81	■■■□□ 2.04
UBE3A-222	ENST00000630907	C1R	P00736	705 aa		27.81	■■■□□ 2.04
UBE3A-222	ENST00000630907	CPB1	P15086	417 aa		27.81	■■■□□ 2.04
UBE3A-222	ENST00000630907	CLCN4	P51793	760 aa		27.81	■■■□□ 2.04
UBE3A-222	ENST00000630907	TSPY1	Q01534	308 aa		27.81	■■■□□ 2.04
UBE3A-222	ENST00000630907	CUL2	Q13617	745 aa		27.81	■■■□□ 2.04
UBE3A-222	ENST00000630907	TRIM65	Q6PJ69	517 aa		27.81	■■■□□ 2.04
UBE3A-222	ENST00000630907	TMEM209	Q96SK2	561 aa		27.81	■■■□□ 2.04
UBE3A-222	ENST00000630907	ZCWPW1	Q9H0M4	648 aa		27.81	■■■□□ 2.04
UBE3A-222	ENST00000630907	HCFC2	Q9Y5Z7	792 aa		27.81	■■■□□ 2.04
UBE3A-222	ENST00000630907	LGALS16	A8MUM7	142 aa		27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907		A8MXQ7	604 aa		27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	TGM5	O43548	720 aa		27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	HCRT	O43612	131 aa		27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	PDGFRB	P09619	1106 aa		27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	OR4Q2	P0C623	313 aa		27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	TBXAS1	P24557	533 aa	Predicted RBP	27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	ACAT1	P24752	427 aa	Known RBP	27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	LMO2	P25791	158 aa		27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	PON1	P27169	355 aa		27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	LLGL2	Q6P1M3	1020 aa		27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	LILRA6	Q6PI73	481 aa		27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	DCP1B	Q8IZD4	617 aa	Known RBP	27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	CDH9	Q9ULB4	789 aa		27.8	■■■□□ 2.04
UBE3A-222	ENST00000630907	WDR27	A2RRH5	827 aa		27.79	■■■□□ 2.04
UBE3A-222	ENST00000630907	ABLIM3	O94929	683 aa		27.79	■■■□□ 2.04
UBE3A-222	ENST00000630907	SERPINC1	P01008	464 aa		27.79	■■■□□ 2.04
UBE3A-222	ENST00000630907	EPCAM	P16422	314 aa		27.79	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms