RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PDLIM7Q9NR12 457 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 SYF2O95926 243 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 URODP06132 367 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 ABCB4P21439 1286 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 SSTR3P32745 418 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 GJC1P36383 396 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 AARSP49588 968 aaKnown RBP eCLIP13.25□□□□□ -0.292e-7■■□□□ 13.7
SYNGAP1-207ENST00000628646 SNX16P57768 344 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 TMEM192Q8IY95 271 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 C18orf25Q96B23 403 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 TMEM117Q9H0C3 514 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 SMIM28A0A1B0GU29 152 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 GOLGA6L10A6NI86 522 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 H2AFZP0C0S5 128 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 RDXP35241 583 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 RFC2P35250 354 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 CFAP221Q4G0U5 840 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 H2AFVQ71UI9 128 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 OR5B17Q8NGF7 314 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 FAM149B1Q96BN6 582 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 TMEM161AQ9NX61 479 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 KIAA1217Q5T5P2 1943 aa13.25□□□□□ -0.29
SYNGAP1-207ENST00000628646 MYH11P35749 1972 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 GOLGA6L10A0A0M3HER8 536 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 A0A0U1RQF3 1178 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 ODC1P11926 461 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 ANXA13P27216 316 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 C2orf54Q08AI8 447 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 CLUL1Q15846 466 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 DCUN1D2Q6PH85 259 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 SLC35C1Q96A29 364 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 OSBPL9Q96SU4 736 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 PLEKHA5Q9HAU0 1116 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 LRRC4Q9HBW1 653 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 IL23AQ9NPF7 189 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 EHD2Q9NZN4 543 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 CCDC66A2RUB6 948 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 ADSSP30520 456 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 ORC1Q13415 861 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 GJB7Q6PEY0 223 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 NPAS4Q8IUM7 802 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 LRRC43Q8N309 656 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 RNF10Q8N5U6 811 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 TNIP3Q96KP6 325 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 NFKBIZQ9BYH8 718 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 APEX2Q9UBZ4 518 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 A0A087X0T9 212 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 ARL5CA6NH57 179 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 AGPSO00116 658 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 FAM228BP0C875 321 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 PASD1Q8IV76 773 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 SLC9A9Q8IVB4 645 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 RNF34Q969K3 372 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 FAM49BQ9NUQ9 324 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 SMARCAL1Q9NZC9 954 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 ADAM21Q9UKJ8 722 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 ITGA11Q9UKX5 1188 aa13.24□□□□□ -0.29
SYNGAP1-207ENST00000628646 ENPP3O14638 875 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 NCK2O43639 380 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 GNL1P36915 607 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 JAM2P57087 298 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 PPP3CAQ08209 521 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 GRIK3Q13003 919 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 LIN9Q5TKA1 542 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 ELMSAN1Q6PJG2 1045 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 CCNI2Q6ZMN8 369 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 AENQ8WTP8 325 aaKnown RBP13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 VIPAS39Q9H9C1 493 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 PCDHGC5Q9Y5F6 944 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 ATP8B3O60423 1300 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 EOMESO95936 686 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 PFKMP08237 780 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 IGFBP4P22692 258 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 PBX3P40426 434 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 NSFP46459 744 aaKnown RBP13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 RPS6KA1Q15418 735 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 TMCO2Q7Z6W1 182 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 NAP1L3Q99457 506 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 SLITRK6Q9H5Y7 841 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 ERVK-5Q9HDB9 667 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 PLCB1Q9NQ66 1216 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 PSD3Q9NYI0 1048 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 MYO7AQ13402 2215 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 WDR81Q562E7 1941 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 CAPN9O14815 690 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 MED7O43513 233 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 PCSK1P29120 753 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 TUSC3Q13454 348 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 HIC1Q14526 733 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 SLC18A3Q16572 532 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 FAM187BQ17R55 369 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 STRA6Q9BX79 667 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 PACSIN1Q9BY11 444 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 PIDD1Q9HB75 910 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 TUBGCP4Q9UGJ1 667 aa13.23□□□□□ -0.29
SYNGAP1-207ENST00000628646 PRRG1O14668 218 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 RAP1GAPP47736 663 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 ELAVL2Q12926 359 aaKnown RBP13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 NAB2Q15742 525 aa13.22□□□□□ -0.29
SYNGAP1-207ENST00000628646 SLC10A6Q3KNW5 377 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms