RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ZP2Q05996 745 aa15.04■□□□□ -0
SNRPA1-216ENST00000626000 PAK1Q13153 545 aa15.04■□□□□ -0
SNRPA1-216ENST00000626000 MAPRE1Q15691 268 aaKnown RBP15.04■□□□□ -0
SNRPA1-216ENST00000626000 NFE2Q16621 373 aaPredicted RBP15.04■□□□□ -0
SNRPA1-216ENST00000626000 SGSM1Q2NKQ1 1148 aa15.04■□□□□ -0
SNRPA1-216ENST00000626000 ZACNQ401N2 412 aa15.04■□□□□ -0
SNRPA1-216ENST00000626000 CT47A1Q5JQC4 288 aaPredicted RBP15.04■□□□□ -0
SNRPA1-216ENST00000626000 TMC5Q6UXY8 1006 aa15.04■□□□□ -0
SNRPA1-216ENST00000626000 OTOP3Q7RTS5 596 aa15.04■□□□□ -0
SNRPA1-216ENST00000626000 ZC3H3Q8IXZ2 948 aaKnown RBP15.04■□□□□ -0
SNRPA1-216ENST00000626000 PLCD3Q8N3E9 789 aa15.04■□□□□ -0
SNRPA1-216ENST00000626000 SMG7Q92540 1137 aaKnown RBP15.04■□□□□ -0
SNRPA1-216ENST00000626000 ACSF2Q96CM8 615 aaPredicted RBP15.04■□□□□ -0
SNRPA1-216ENST00000626000 BORCS6Q96GS4 357 aa15.04■□□□□ -0
SNRPA1-216ENST00000626000 FAXDC2Q96IV6 333 aa15.04■□□□□ -0
SNRPA1-216ENST00000626000 ACBD6Q9BR61 282 aa15.04■□□□□ -0
SNRPA1-216ENST00000626000 LMBRD1Q9NUN5 540 aa15.04■□□□□ -0
SNRPA1-216ENST00000626000 ZFP37Q9Y6Q3 630 aaPredicted RBP15.04■□□□□ -0
SNRPA1-216ENST00000626000 WDR27A2RRH5 827 aa15.03■□□□□ -0
SNRPA1-216ENST00000626000 PTMSP20962 102 aa15.03■□□□□ -0
SNRPA1-216ENST00000626000 IGFBP6P24592 240 aaPredicted RBP15.03■□□□□ -0
SNRPA1-216ENST00000626000 SSTR3P32745 418 aaPredicted RBP15.03■□□□□ -0
SNRPA1-216ENST00000626000 TUFMP49411 452 aaKnown RBP15.03■□□□□ -0
SNRPA1-216ENST00000626000 CASP4P49662 377 aa15.03■□□□□ -0
SNRPA1-216ENST00000626000 ARPP19P56211 112 aa15.03■□□□□ -0
SNRPA1-216ENST00000626000 NCOA4Q13772 614 aa15.03■□□□□ -0
SNRPA1-216ENST00000626000 LMBRD2Q68DH5 695 aaPredicted RBP15.03■□□□□ -0
SNRPA1-216ENST00000626000 ADGRF2Q8IZF7 708 aa15.03■□□□□ -0
SNRPA1-216ENST00000626000 GJD3Q8N144 294 aa15.03■□□□□ -0
SNRPA1-216ENST00000626000 SLC7A14Q8TBB6 771 aa15.03■□□□□ -0
SNRPA1-216ENST00000626000 SPPL2BQ8TCT7 592 aa15.03■□□□□ -0
SNRPA1-216ENST00000626000 FAM124BQ9H5Z6 455 aaPredicted RBP15.03■□□□□ -0
SNRPA1-216ENST00000626000 CYP4F11Q9HBI6 524 aa15.03■□□□□ -0
SNRPA1-216ENST00000626000 WDR6Q9NNW5 1121 aaKnown RBP15.03■□□□□ -0
SNRPA1-216ENST00000626000 ARMCX3Q9UH62 379 aaPredicted RBP15.03■□□□□ -0
SNRPA1-216ENST00000626000 TIMM13Q9Y5L4 95 aaPredicted RBP15.03■□□□□ -0
SNRPA1-216ENST00000626000 C19orf67A6NJJ6 358 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 TNFRSF10AO00220 468 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 ADAM12O43184 909 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 N4BP1O75113 896 aaKnown RBP15.02■□□□□ -0
SNRPA1-216ENST00000626000 TACC1O75410 805 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 CLSTN1O94985 981 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 C4BPAP04003 597 aaKnown RBP15.02■□□□□ -0
SNRPA1-216ENST00000626000 CAMK4Q16566 473 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 ZNF699Q32M78 642 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 ZNF667Q5HYK9 610 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 WSCD1Q658N2 575 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 ANKRD40Q6AI12 368 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 IQCEQ6IPM2 695 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 RSPO2Q6UXX9 243 aaPredicted RBP15.02■□□□□ -0
SNRPA1-216ENST00000626000 SV2AQ7L0J3 742 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 FILIP1Q7Z7B0 1213 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 PDCL2Q8N4E4 241 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 TTC39CQ8N584 583 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 TDRD5Q8NAT2 981 aaKnown RBP15.02■□□□□ -0
SNRPA1-216ENST00000626000 NELFBQ8WX92 580 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 ERCC4Q92889 916 aaPredicted RBP15.02■□□□□ -0
SNRPA1-216ENST00000626000 MMS19Q96T76 1030 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 COL25A1Q9BXS0 654 aaPredicted RBP15.02■□□□□ -0
SNRPA1-216ENST00000626000 ZCWPW1Q9H0M4 648 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 TMEM8AQ9HCN3 771 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 ABCB6Q9NP58 842 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.02■□□□□ -0
SNRPA1-216ENST00000626000 ASB3Q9Y575 518 aa15.02■□□□□ -0
SNRPA1-216ENST00000626000 TCF20Q9UGU0 1960 aaKnown RBP15.02□□□□□ -0.01
SNRPA1-216ENST00000626000 DENND4AQ7Z401 1863 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 TTC28Q96AY4 2481 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 CLUHO75153 1309 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 LOC730098B7Z3J9 87 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 BIN1O00499 593 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 GABRDO14764 452 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 FGF19O95750 216 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 SPATA31D3P0C874 917 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 WARSP23381 471 aaKnown RBP15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 PIK3CAP42336 1068 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 ALDH1A3P47895 512 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 ADCY1Q08828 1119 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 CETN1Q12798 172 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 WDR72Q3MJ13 1102 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 TDRD10Q5VZ19 366 aaKnown RBP15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 KRT39Q6A163 491 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 SPATA31D4Q6ZUB0 917 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 LIMS2Q7Z4I7 341 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 FRMD5Q7Z6J6 570 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 ITIH5Q86UX2 942 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 C12orf76Q8N812 135 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 ZNF516Q92618 1163 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 ZNF707Q96C28 371 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 FUBP3Q96I24 572 aaKnown RBP eCLIP15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 APOL5Q9BWW9 433 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 GZF1Q9H116 711 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 POMKQ9H5K3 350 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 AVENQ9NQS1 362 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 DDX43Q9NXZ2 648 aaKnown RBP15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 RWDD2AQ9UIY3 292 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 L1RE1Q9UN81 338 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 INSL5Q9Y5Q6 135 aa15.01□□□□□ -0.01
SNRPA1-216ENST00000626000 PPP1R3GB7ZBB8 358 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 ZNF197O14709 1029 aa15□□□□□ -0.01
SNRPA1-216ENST00000626000 RFPL2O75678 378 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms