RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 FAM78AQ5JUQ0 283 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 TANGO2Q6ICL3 276 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 POTEHQ6S545 545 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 EPM2AIP1Q7L775 607 aaPredicted RBP11.68□□□□□ -0.54
SSBP4-215ENST00000625926 ITIH5Q86UX2 942 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 CCDC105Q8IYK2 499 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 CEP57L1Q8IYX8 460 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 DCP1BQ8IZD4 617 aaKnown RBP11.68□□□□□ -0.54
SSBP4-215ENST00000625926 LRRC52Q8N7C0 313 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 C1orf127Q8N9H9 656 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 DTWD2Q8NBA8 298 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 C2orf15Q8WU43 125 aaKnown RBP11.68□□□□□ -0.54
SSBP4-215ENST00000625926 SMARCD2Q92925 531 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 PHOX2BQ99453 314 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 PLA2G2FQ9BZM2 168 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 GPR88Q9GZN0 384 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 HSPBP1Q9NZL4 362 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 ITGA11Q9UKX5 1188 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 SIT1Q9Y3P8 196 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 R3HCC1Q9Y3T6 440 aaKnown RBP11.68□□□□□ -0.54
SSBP4-215ENST00000625926 DCHS1Q96JQ0 3298 aa11.68□□□□□ -0.54
SSBP4-215ENST00000625926 TDRD15B5MCY1 1934 aaKnown RBP11.68□□□□□ -0.54
SSBP4-215ENST00000625926 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.67□□□□□ -0.54
SSBP4-215ENST00000625926 TGFB1I1O43294 461 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 HUS1O60921 280 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 FGF19O95750 216 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 SLFN14P0C7P3 912 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 GJA1P17302 382 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 CASP1P29466 404 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 EHHADHQ08426 723 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 CUL4BQ13620 913 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 TEAD2Q15562 447 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 MLF2Q15773 248 aaPredicted RBP11.67□□□□□ -0.54
SSBP4-215ENST00000625926 DUOXA2Q1HG44 320 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 MGAT5BQ3V5L5 792 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 HS2ST1Q7LGA3 356 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 DNAJB7Q7Z6W7 309 aaPredicted RBP11.67□□□□□ -0.54
SSBP4-215ENST00000625926 LRRTM3Q86VH5 581 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 CBWD2Q8IUF1 395 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 CXorf38Q8TB03 319 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 FAM200AQ8TCP9 573 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 SPPL2BQ8TCT7 592 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 SCFD1Q8WVM8 642 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 PSMG2Q969U7 264 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 ANKRD36BP1Q96IX9 119 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 ZSWIM3Q96MP5 696 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 ASB16Q96NS5 453 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 SEPT5Q99719 369 aaPredicted RBP11.67□□□□□ -0.54
SSBP4-215ENST00000625926 LRRC3Q9BY71 257 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 MTMR12Q9C0I1 747 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 DNAJC25Q9H1X3 360 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 AGPAT3Q9NRZ7 376 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 FAM86C1Q9NVL1 165 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 INTS13Q9NVM9 706 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 GDAP2Q9NXN4 497 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 SERTAD1Q9UHV2 236 aa11.67□□□□□ -0.54
SSBP4-215ENST00000625926 UBE4BO95155 1302 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 A0A1W2PRU2 124 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 KANSL1LA0AUZ9 987 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 NRG2O14511 850 aaPredicted RBP11.66□□□□□ -0.54
SSBP4-215ENST00000625926 SOAT2O75908 522 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 TNNC2P02585 160 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 CMA1P23946 247 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 FCARP24071 287 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 KRT85P78386 507 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 TSPY1Q01534 308 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 BFSP1Q12934 665 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 MYO1EQ12965 1108 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 VEPH1Q14D04 833 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 TAF12Q16514 161 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 SNRNP35Q16560 246 aaKnown RBP11.66□□□□□ -0.54
SSBP4-215ENST00000625926 NFE2Q16621 373 aaPredicted RBP11.66□□□□□ -0.54
SSBP4-215ENST00000625926 BMT2Q1RMZ1 405 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 LMBRD2Q68DH5 695 aaPredicted RBP11.66□□□□□ -0.54
SSBP4-215ENST00000625926 TMC8Q8IU68 726 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 WDR49Q8IV35 697 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 NELFCDQ8IXH7 590 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 TMEM86AQ8N2M4 240 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 PDCL2Q8N4E4 241 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 TTC9BQ8N6N2 239 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 TOP6BLQ8N6T0 577 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 RDH13Q8NBN7 331 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 SHKBP1Q8TBC3 707 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 ZSCAN18Q8TBC5 510 aaPredicted RBP11.66□□□□□ -0.54
SSBP4-215ENST00000625926 LEO1Q8WVC0 666 aaPredicted RBP11.66□□□□□ -0.54
SSBP4-215ENST00000625926 E2F7Q96AV8 911 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 PAGE5Q96GU1 130 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 SPATA32Q96LK8 384 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 ACBD6Q9BR61 282 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 DDX23Q9BUQ8 820 aaKnown RBP11.66□□□□□ -0.54
SSBP4-215ENST00000625926 TRMT61BQ9BVS5 477 aaKnown RBP11.66□□□□□ -0.54
SSBP4-215ENST00000625926 ATXN3LQ9H3M9 355 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 SLITRK6Q9H5Y7 841 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 TRPV4Q9HBA0 871 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 SLC39A2Q9NP94 309 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 CGNQ9P2M7 1197 aaKnown RBP11.66□□□□□ -0.54
SSBP4-215ENST00000625926 USP25Q9UHP3 1055 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 ZDHHC9Q9Y397 364 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 ATP6V1DQ9Y5K8 247 aa11.66□□□□□ -0.54
SSBP4-215ENST00000625926 SNX9Q9Y5X1 595 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms