RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 SF3B1O75533 1304 aaKnown RBP eCLIP17.75■□□□□ 0.43
CCNA1-203ENST00000625767 MFAP3LO75121 409 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 CILPO75339 1184 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 GFPT2O94808 682 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 PDGFRBP09619 1106 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 KRT5P13647 590 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 P4HA1P13674 534 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 DNAJB1P25685 340 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 KRT9P35527 623 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 USP8P40818 1118 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 NDST1P52848 882 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 ARID5AQ03989 594 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 KIAA0319Q5VV43 1072 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 TMEM270Q6UE05 265 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 PPFIBP1Q86W92 1011 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 TC2NQ8N9U0 490 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 PDLIM2Q96JY6 352 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 SPAG5Q96R06 1193 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 TMEM209Q96SK2 561 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 NUP58Q9BVL2 599 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 ELOVL4Q9GZR5 314 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 COL4A4P53420 1690 aaPredicted RBP17.74■□□□□ 0.43
CCNA1-203ENST00000625767 A0A1W2PQJ5 194 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 C2CD2LO14523 706 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 GABRDO14764 452 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 CYP26A1O43174 497 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 ATP2C2O75185 946 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 TACC1O75410 805 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 CYP11A1P05108 521 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 FGFR3P22607 806 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 DNAJB2P25686 324 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 INCA1Q0VD86 236 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 PRSS55Q6UWB4 352 aaPredicted RBP17.74■□□□□ 0.43
CCNA1-203ENST00000625767 OR6B3Q8NGW1 331 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 CYP3A43Q9HB55 503 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 AAASQ9NRG9 546 aa17.74■□□□□ 0.43
CCNA1-203ENST00000625767 EPOPA6NHQ4 379 aa17.73■□□□□ 0.43
CCNA1-203ENST00000625767 RFX1P22670 979 aa17.73■□□□□ 0.43
CCNA1-203ENST00000625767 WARSP23381 471 aaKnown RBP17.73■□□□□ 0.43
CCNA1-203ENST00000625767 SSTR3P32745 418 aaPredicted RBP17.73■□□□□ 0.43
CCNA1-203ENST00000625767 CLCN1P35523 988 aa17.73■□□□□ 0.43
CCNA1-203ENST00000625767 RAD23BP54727 409 aa17.73■□□□□ 0.43
CCNA1-203ENST00000625767 PSMC1P62191 440 aaKnown RBP17.73■□□□□ 0.43
CCNA1-203ENST00000625767 VARS2Q5ST30 1063 aaKnown RBP17.73■□□□□ 0.43
CCNA1-203ENST00000625767 RSPO2Q6UXX9 243 aaPredicted RBP17.73■□□□□ 0.43
CCNA1-203ENST00000625767 DPH6Q7L8W6 267 aa17.73■□□□□ 0.43
CCNA1-203ENST00000625767 RBBP8NLQ8NC74 664 aaPredicted RBP17.73■□□□□ 0.43
CCNA1-203ENST00000625767 OR10T2Q8NGX3 314 aa17.73■□□□□ 0.43
CCNA1-203ENST00000625767 DDX43Q9NXZ2 648 aaKnown RBP17.73■□□□□ 0.43
CCNA1-203ENST00000625767 BARX2Q9UMQ3 279 aaPredicted RBP17.73■□□□□ 0.43
CCNA1-203ENST00000625767 LUC7L2Q9Y383 392 aaKnown RBP17.73■□□□□ 0.43
CCNA1-203ENST00000625767 PCDHGC5Q9Y5F6 944 aa17.73■□□□□ 0.43
CCNA1-203ENST00000625767 MYH10P35580 1976 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 FAM170AA1A519 330 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 A8MXQ7 604 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 TRAPPC3O43617 180 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 SOX5P35711 763 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 PPM1AP35813 382 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 GNL1P36915 607 aaPredicted RBP17.72■□□□□ 0.43
CCNA1-203ENST00000625767 ZNF132P52740 706 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 ZBED6P86452 979 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 YWHAHQ04917 246 aaPredicted RBP17.72■□□□□ 0.43
CCNA1-203ENST00000625767 TRIM14Q14142 442 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 PPP2R2DQ66LE6 453 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 OVOS1Q6IE37 1185 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 ENOSF1Q7L5Y1 443 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 CCDC186Q7Z3E2 898 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 ACOT1Q86TX2 421 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 SLC47A2Q86VL8 602 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 FAM71AQ8IYT1 594 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 VPS52Q8N1B4 723 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 C12orf29Q8N999 325 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 SLC4A11Q8NBS3 891 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 FAXDC2Q96IV6 333 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 TGS1Q96RS0 853 aaKnown RBP17.72■□□□□ 0.43
CCNA1-203ENST00000625767 ABHD10Q9NUJ1 306 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 MSRAQ9UJ68 235 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 STXBP5LQ9Y2K9 1186 aa17.72■□□□□ 0.43
CCNA1-203ENST00000625767 SPTBN5Q9NRC6 3674 aaKnown RBP17.72■□□□□ 0.43
CCNA1-203ENST00000625767 XIRP2A4UGR9 3374 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 AKR1B15C9JRZ8 316 aaPredicted RBP17.71■□□□□ 0.43
CCNA1-203ENST00000625767 SYN3O14994 580 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 GRM6O15303 877 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 SOD2P04179 222 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 OR4Q2P0C623 313 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 SKILP12757 684 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 RPL17P18621 184 aaKnown RBP17.71■□□□□ 0.43
CCNA1-203ENST00000625767 TYMPP19971 482 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 ERVK-21P61565 698 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 PLCB3Q01970 1234 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 RAB30Q15771 203 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 WDR59Q6PJI9 974 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.71■□□□□ 0.43
CCNA1-203ENST00000625767 IRF2BP2Q7Z5L9 587 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 DDX53Q86TM3 631 aaKnown RBP17.71■□□□□ 0.43
CCNA1-203ENST00000625767 ZSWIM1Q9BR11 485 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 TTPALQ9BTX7 342 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 SNX25Q9H3E2 840 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 CHST7Q9NS84 486 aa17.71■□□□□ 0.43
CCNA1-203ENST00000625767 CNTN6Q9UQ52 1028 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms