RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 MTFR1Q15390 333 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 GNPTABQ3T906 1256 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 GBP7Q8N8V2 638 aaPredicted RBP11.9□□□□□ -0.5
VARS2-213ENST00000625423 KLHL29Q96CT2 875 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 RXFP1Q9HBX9 757 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 ZNF302Q9NR11 478 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 GEMIN8Q9NWZ8 242 aaKnown RBP11.9□□□□□ -0.5
VARS2-213ENST00000625423 KLHL14Q9P2G3 628 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 FER1L6Q2WGJ9 1857 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 TJP3O95049 919 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 PIGRP01833 764 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 OATP04181 439 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 ALDH5A1P51649 535 aaPredicted RBP11.9□□□□□ -0.5
VARS2-213ENST00000625423 IL9RQ01113 521 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 OGDHQ02218 1023 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 ZNF268Q14587 947 aaPredicted RBP11.9□□□□□ -0.5
VARS2-213ENST00000625423 EAPPQ56P03 285 aaPredicted RBP11.9□□□□□ -0.5
VARS2-213ENST00000625423 GIMAP7Q8NHV1 300 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 MRRFQ96E11 262 aaKnown RBP11.9□□□□□ -0.5
VARS2-213ENST00000625423 PITPNM3Q9BZ71 974 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 DHX33Q9H6R0 707 aaKnown RBP11.9□□□□□ -0.5
VARS2-213ENST00000625423 KIF9Q9HAQ2 790 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 GINM1Q9NU53 330 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 KCNG1Q9UIX4 513 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 TRIM33Q9UPN9 1127 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 DOCK5Q9H7D0 1870 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 RGPD3A6NKT7 1758 aaPredicted RBP11.9□□□□□ -0.51
VARS2-213ENST00000625423 RGPD4Q7Z3J3 1758 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.51
VARS2-213ENST00000625423 ARL2P36404 184 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 DCUN1D2Q6PH85 259 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 SPOCD1Q6ZMY3 1216 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 SAMD7Q7Z3H4 446 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 TRABD2AQ86V40 505 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 ALLCQ8N6M5 410 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 SLC7A3Q8WY07 619 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 THOC1Q96FV9 657 aaKnown RBP11.9□□□□□ -0.51
VARS2-213ENST00000625423 PLCD4Q9BRC7 762 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 ADAM33Q9BZ11 813 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 FOXP3Q9BZS1 431 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 VPS37BQ9H9H4 285 aa11.9□□□□□ -0.51
VARS2-213ENST00000625423 ARID2Q68CP9 1835 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 TNFSF9P41273 254 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 ZNF132P52740 706 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 PLCB3Q01970 1234 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 FSTL1Q12841 308 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 RIPK1Q13546 671 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 DNAJC24Q6P3W2 148 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 ECHDC2Q86YB7 292 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 RIBC1Q8N443 379 aaPredicted RBP11.89□□□□□ -0.51
VARS2-213ENST00000625423 ZNF280CQ8ND82 737 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 CCHCR1Q8TD31 782 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 IMPG2Q9BZV3 1241 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 MAFBQ9Y5Q3 323 aaPredicted RBP11.89□□□□□ -0.51
VARS2-213ENST00000625423 ADGRA2Q96PE1 1338 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 IFNB1P01574 187 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 TGFB2P61812 414 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 PKN2Q16513 984 aaKnown RBP11.89□□□□□ -0.51
VARS2-213ENST00000625423 PRAMEF18Q5VWM3 479 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 CEP128Q6ZU80 1094 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 ZBED8Q8IZ13 594 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 TMEM121Q9BTD3 319 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 VPS33BQ9H267 617 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 CXorf56Q9H5V9 222 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 ACAD9Q9H845 621 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 STK38LQ9Y2H1 464 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 L3MBTL1Q9Y468 752 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 KIAA1217Q5T5P2 1943 aa11.89□□□□□ -0.51
VARS2-213ENST00000625423 LRRD1A4D1F6 860 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 A8MUI8 341 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 ASMTLO95671 621 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 KRT16P08779 473 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 PTPRAP18433 802 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 KRT15P19012 456 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 DNAJC3Q13217 504 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 WDR72Q3MJ13 1102 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 ACCSLQ4AC99 568 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 RNF43Q68DV7 783 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 PPP1R2P3Q6NXS1 205 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 DRICH1Q6PGQ1 229 aaPredicted RBP11.88□□□□□ -0.51
VARS2-213ENST00000625423 ZBTB33Q86T24 672 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 SCYL3Q8IZE3 742 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 C4orf33Q8N1A6 199 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 ANKLE1Q8NAG6 615 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 PRCCQ92733 491 aaPredicted RBP11.88□□□□□ -0.51
VARS2-213ENST00000625423 TRABDQ9H4I3 376 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 PIM2Q9P1W9 311 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 HACL1Q9UJ83 578 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 WDR81Q562E7 1941 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 hCG_1818297A0A087WSY0 165 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 TCRBV5S1A1TA0A578 114 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 GOLGA8SH3BPF8 625 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 GOLGA8MH3BSY2 632 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 BANF1O75531 89 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 CALB1P05937 261 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 PSMC4P43686 418 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 OAZ1P54368 228 aa11.88□□□□□ -0.51
VARS2-213ENST00000625423 CYP4A22Q5TCH4 519 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms