RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 MT-ND5P03915 603 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 ITGB3P05106 788 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 HOXA5P20719 270 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 FGFR2P21802 821 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 FGFR4P22455 802 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 ZFP36P26651 326 aaKnown RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 KLRC1P26715 233 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 HSPA7P48741 367 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 ZNF134P52741 427 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 HSD11B2P80365 405 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 FAM189BP81408 668 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 CHAF1AQ13111 956 aaPredicted RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 DHX8Q14562 1220 aaKnown RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 RRP1BQ14684 758 aaKnown RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 MPEG1Q2M385 716 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 ZIK1Q3SY52 487 aaPredicted RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 PDCD4Q53EL6 469 aaKnown RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 TAPT1Q6NXT6 567 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 GLB1LQ6UWU2 654 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 UNC13DQ70J99 1090 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 SIAH1Q8IUQ4 282 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 MPP5Q8N3R9 675 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 Q8NA96 180 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 OR56A1Q8NGH5 318 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 ZNF483Q8TF39 744 aaPredicted RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 NUP133Q8WUM0 1156 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 SNX22Q96L94 193 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 COLEC11Q9BWP8 271 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 GPR87Q9BY21 358 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 ZNF518BQ9C0D4 1074 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 TTYH3Q9C0H2 523 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 MS4A7Q9GZW8 240 aaPredicted RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 CHST8Q9H2A9 424 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 MYH16Q9H6N6 1097 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 TRMT13Q9NUP7 481 aaKnown RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 MYO1AQ9UBC5 1043 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 PADI4Q9UM07 663 aa3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 USP15Q9Y4E8 981 aaPredicted RBP3.37□□□□□ -1.87
SCARNA4-202ENST00000625402 A0A087WV62 115 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 A0A1B0GTW7 788 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 PIP5K1CO60331 668 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 TBC1D4O60343 1298 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 NBNO60934 754 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 ZNF623O75123 536 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 CHEK2O96017 543 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 ANXA2P07355 339 aaKnown RBP3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 CKBP12277 381 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 MGAT1P26572 445 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 CARSP49589 748 aaKnown RBP3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 MAN2A2P49641 1150 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 MAPK10P53779 464 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 POU6F2P78424 691 aaPredicted RBP3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 RAB32Q13637 225 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 TRIM14Q14142 442 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 R3HDM1Q15032 1099 aaKnown RBP3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 KRTAP19-4Q3LI73 84 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 LONRF3Q496Y0 759 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 RRAGBQ5VZM2 374 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 FAM160B1Q5W0V3 765 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 TSHZ3Q63HK5 1081 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 LMBRD2Q68DH5 695 aaPredicted RBP3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 TAF2Q6P1X5 1199 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 TSHZ1Q6ZSZ6 1077 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 TMPRSS9Q7Z410 1059 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 ZNF280BQ86YH2 543 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 ANKRD35Q8N283 1001 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 ENAHQ8N8S7 591 aaPredicted RBP3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 ATP11CQ8NB49 1132 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 PSD4Q8NDX1 1056 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 RAPGEF4Q8WZA2 1011 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 IQCDQ96DY2 449 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 C20orf173Q96LM9 149 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 SLC46A1Q96NT5 459 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 GDF15Q99988 308 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 BDH2Q9BUT1 245 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 CNPPD1Q9BV87 410 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 TTLL2Q9BWV7 592 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 STK31Q9BXU1 1019 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 KRTAP3-1Q9BYR8 98 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 ZNF768Q9H5H4 540 aaKnown RBP3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 PPCSQ9HAB8 311 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 XPR1Q9UBH6 696 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 ST6GALNAC2Q9UJ37 374 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 MID2Q9UJV3 735 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 CLCA2Q9UQC9 943 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 TMX2Q9Y320 296 aa3.36□□□□□ -1.87
SCARNA4-202ENST00000625402 KRTAP23-1A1A580 65 aa3.35□□□□□ -1.87
SCARNA4-202ENST00000625402 POLRMTO00411 1230 aaKnown RBP3.35□□□□□ -1.87
SCARNA4-202ENST00000625402 SUN1O94901 812 aa3.35□□□□□ -1.87
SCARNA4-202ENST00000625402 NDST3O95803 873 aa3.35□□□□□ -1.87
SCARNA4-202ENST00000625402 THP07101 528 aa3.35□□□□□ -1.87
SCARNA4-202ENST00000625402 TXNP10599 105 aaKnown RBP3.35□□□□□ -1.87
SCARNA4-202ENST00000625402 NR4A1P22736 598 aa3.35□□□□□ -1.87
SCARNA4-202ENST00000625402 PDIA3P30101 505 aaKnown RBP3.35□□□□□ -1.87
SCARNA4-202ENST00000625402 VIPR2P41587 438 aa3.35□□□□□ -1.87
SCARNA4-202ENST00000625402 GALNT1Q10472 559 aaPredicted RBP3.35□□□□□ -1.87
SCARNA4-202ENST00000625402 TOB2Q14106 344 aaPredicted RBP3.35□□□□□ -1.87
SCARNA4-202ENST00000625402 KRT72Q14CN4 511 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms