RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ATMINO43313 823 aaPredicted RBP17.35■□□□□ 0.37
LDB3-208ENST00000623007 RAD51CO43502 376 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 C6orf222P0C671 652 aaPredicted RBP17.35■□□□□ 0.37
LDB3-208ENST00000623007 FNTAP49354 379 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 AARSP49588 968 aaKnown RBP eCLIP17.35■□□□□ 0.37
LDB3-208ENST00000623007 DRG2P55039 364 aaKnown RBP17.35■□□□□ 0.37
LDB3-208ENST00000623007 ACAP1Q15027 740 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 CNGA2Q16280 664 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 CYP1B1Q16678 543 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 GLIPR1L2Q4G1C9 344 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 DCAF12L1Q5VU92 463 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 MMS22LQ6ZRQ5 1243 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 UNC93AQ86WB7 457 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 MREGQ8N565 214 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 SEC14L1Q92503 715 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 GPBP1L1Q9HC44 474 aaPredicted RBP17.35■□□□□ 0.37
LDB3-208ENST00000623007 SMARCAL1Q9NZC9 954 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 PARP2Q9UGN5 583 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 PCYOX1Q9UHG3 505 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 GINS2Q9Y248 185 aa17.35■□□□□ 0.37
LDB3-208ENST00000623007 SPDYE4A6NLX3 237 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 CSDE1O75534 798 aaKnown RBP17.34■□□□□ 0.37
LDB3-208ENST00000623007 SASH3O75995 380 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 KCNE1P15382 129 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 CD19P15391 556 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 PLA2G4AP47712 749 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 RAD23BP54727 409 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 RNASE9P60153 205 aaKnown RBP17.34■□□□□ 0.37
LDB3-208ENST00000623007 ZBTB6Q15916 424 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 SGO2Q562F6 1265 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 GNASQ5JWF2 1037 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 ALKAL1Q6UXT8 129 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 SYDE1Q6ZW31 735 aaPredicted RBP17.34■□□□□ 0.37
LDB3-208ENST00000623007 SLC13A5Q86YT5 568 aaPredicted RBP17.34■□□□□ 0.37
LDB3-208ENST00000623007 NIPA2Q8N8Q9 360 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 C12orf50Q8NA57 414 aaPredicted RBP17.34■□□□□ 0.37
LDB3-208ENST00000623007 LRRC45Q96CN5 670 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 FAM84AQ96KN4 292 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 NT5C1AQ9BXI3 368 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 CFHR5Q9BXR6 569 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 CELF4Q9BZC1 486 aaKnown RBP17.34■□□□□ 0.37
LDB3-208ENST00000623007 GTF2IRD1Q9UHL9 959 aa17.34■□□□□ 0.37
LDB3-208ENST00000623007 PIN4Q9Y237 131 aaKnown RBP17.34■□□□□ 0.37
LDB3-208ENST00000623007 BHMG1C9JSJ3 638 aaPredicted RBP17.33■□□□□ 0.37
LDB3-208ENST00000623007 TREHO43280 583 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 GNRH1P01148 92 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 GLI1P08151 1106 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 SETSIPP0DME0 302 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 DESP17661 470 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 BRD2P25440 801 aaKnown RBP17.33■□□□□ 0.37
LDB3-208ENST00000623007 CST5P28325 142 aaPredicted RBP17.33■□□□□ 0.37
LDB3-208ENST00000623007 COPS2P61201 443 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 ZNF268Q14587 947 aaPredicted RBP17.33■□□□□ 0.37
LDB3-208ENST00000623007 XKR4Q5GH76 650 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 DCUN1D2Q6PH85 259 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 SCARA5Q6ZMJ2 495 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 PASD1Q8IV76 773 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 KATNAL2Q8IYT4 538 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 PCSK9Q8NBP7 692 aaKnown RBP17.33■□□□□ 0.37
LDB3-208ENST00000623007 FAM71BQ8TC56 605 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 IPO4Q8TEX9 1081 aaKnown RBP17.33■□□□□ 0.37
LDB3-208ENST00000623007 RBM41Q96IZ5 413 aaKnown RBP17.33■□□□□ 0.37
LDB3-208ENST00000623007 NCAPGQ9BPX3 1015 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 AP1M1Q9BXS5 423 aa17.33■□□□□ 0.37
LDB3-208ENST00000623007 DDX56Q9NY93 547 aaKnown RBP17.33■□□□□ 0.37
LDB3-208ENST00000623007 TMEM191CA6NGB0 347 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 FSCN2O14926 492 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 CABYRO75952 493 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 CBX1P83916 185 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 SLC7A5Q01650 507 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 DR1Q01658 176 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 SPDYCQ5MJ68 293 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 RUFY4Q6ZNE9 571 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 FAM43BQ6ZT52 329 aaPredicted RBP17.32■□□□□ 0.36
LDB3-208ENST00000623007 C1orf131Q8NDD1 294 aaKnown RBP17.32■□□□□ 0.36
LDB3-208ENST00000623007 EXD1Q8NHP7 514 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 GRK7Q8WTQ7 553 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 HDAC7Q8WUI4 952 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 KRT35Q92764 455 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 SLCO2A1Q92959 643 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 ELMO3Q96BJ8 720 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 C18orf8Q96DM3 657 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 SNTG2Q9NY99 539 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.32■□□□□ 0.36
LDB3-208ENST00000623007 TRPV2Q9Y5S1 764 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 SIGLEC16A6NMB1 481 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 FLT3LGP49771 235 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 MRPS6P82932 125 aaKnown RBP17.32■□□□□ 0.36
LDB3-208ENST00000623007 BEX3Q00994 111 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 MTMR3Q13615 1198 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 DPH6Q7L8W6 267 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 RCOR2Q8IZ40 523 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 SLC4A11Q8NBS3 891 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 RUFY1Q96T51 708 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 DDX47Q9H0S4 455 aaKnown RBP17.32■□□□□ 0.36
LDB3-208ENST00000623007 LRRC19Q9H756 370 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 SYNCQ9H7C4 482 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 SLC38A7Q9NVC3 462 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 POLIQ9UNA4 740 aa17.32■□□□□ 0.36
LDB3-208ENST00000623007 MEFVO15553 781 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms