RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	TSTD1	Q8NFU3	115 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	CCDC43	Q96MW1	224 aa	Known RBP	11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	HPS4	Q9NQG7	708 aa		11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	THG1L	Q9NWX6	298 aa	Known RBP	11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	ATXN2	Q99700	1313 aa	Known RBP	11.28	□□□□□ -0.6
RRP12-215	ENST00000622320	PTPRD	P23468	1912 aa		11.27	□□□□□ -0.6
RRP12-215	ENST00000622320	PLXNB3	Q9ULL4	1909 aa		11.27	□□□□□ -0.6
RRP12-215	ENST00000622320	PCDH15	Q96QU1	1955 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	USO1	O60763	962 aa	Known RBP	11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	PLA2G2A	P14555	144 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	GCFC2	P16383	781 aa	Known RBP	11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	DRD1	P21728	446 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	PRPF4B	Q13523	1007 aa	Known RBP	11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	DCAF4L1	Q3SXM0	396 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	NAIF1	Q69YI7	327 aa	Predicted RBP	11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	GAREM2	Q75VX8	874 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	NEK8	Q86SG6	692 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	DIS3L2	Q8IYB7	885 aa	Known RBP	11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	HDDC3	Q8N4P3	179 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	BEST2	Q8NFU1	509 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	FAM20A	Q96MK3	541 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	UBL7	Q96S82	380 aa	Predicted RBP	11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	NAP1L4	Q99733	375 aa	Known RBP	11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	FOXP1	Q9H334	677 aa	Predicted RBP	11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	ATXN3L	Q9H3M9	355 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	FZD8	Q9H461	694 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	BRMS1	Q9HCU9	246 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	GPRC5C	Q9NQ84	441 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	NUB1	Q9Y5A7	615 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	ADAMTS9	Q9P2N4	1935 aa		11.27	□□□□□ -0.61
RRP12-215	ENST00000622320	FAM205C	A6NFA0	338 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	OTOL1	A6NHN0	477 aa	Predicted RBP	11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	VNN2	O95498	520 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	EDN1	P05305	212 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	U2AF2	P26368	475 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	GABRR2	P28476	465 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	ATXN3	P54252	364 aa	Predicted RBP	11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	EPHB3	P54753	998 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	CYP4F8	P98187	520 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	RUNX3	Q13761	415 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	TRIM29	Q14134	588 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	TRIM68	Q6AZZ1	485 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	ANO7	Q6IWH7	933 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	PIK3AP1	Q6ZUJ8	805 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	ARMCX6	Q7L4S7	300 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	TPH2	Q8IWU9	490 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	EZH1	Q92800	747 aa	Predicted RBP	11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	CRELD1	Q96HD1	420 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	C8orf76	Q96K31	380 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	PGLYRP2	Q96PD5	576 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	FAM83C	Q9BQN1	747 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	SMG9	Q9H0W8	520 aa	Known RBP	11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	CRISPLD1	Q9H336	500 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	EBF3	Q9H4W6	596 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	GKN1	Q9NS71	199 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	USP20	Q9Y2K6	914 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	PLXND1	Q9Y4D7	1925 aa		11.26	□□□□□ -0.61
RRP12-215	ENST00000622320	SMIM28	A0A1B0GU29	152 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	FGF19	O95750	216 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	CFI	P05156	583 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	ARSA	P15289	507 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	LIG1	P18858	919 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	WEE1	P30291	646 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	RARRES1	P49788	294 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	AMPD2	Q01433	879 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	HNRNPD	Q14103	355 aa	Known RBP	11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	MAPK6	Q16659	721 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	SLC23A3	Q6PIS1	610 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	RASSF3	Q86WH2	238 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	SYT12	Q8IV01	421 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	FAM184A	Q8NB25	1140 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	ADAMTS14	Q8WXS8	1223 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	HAS1	Q92839	578 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	SNX21	Q969T3	373 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	SUSD3	Q96L08	255 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	CNOT6L	Q96LI5	555 aa	Known RBP	11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	P2RY13	Q9BPV8	354 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	GTPBP2	Q9BX10	602 aa	Known RBP	11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	CCDC113	Q9H0I3	377 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	C2orf40	Q9H1Z8	148 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	TASP1	Q9H6P5	420 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	FSCN3	Q9NQT6	498 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	ANKEF1	Q9NU02	776 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	SLC38A7	Q9NVC3	462 aa		11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	MBD1	Q9UIS9	605 aa	Predicted RBP	11.25	□□□□□ -0.61
RRP12-215	ENST00000622320	PI4KA	P42356	2102 aa		11.24	□□□□□ -0.61
RRP12-215	ENST00000622320	TSC2	P49815	1807 aa		11.24	□□□□□ -0.61
RRP12-215	ENST00000622320	OBSL1	O75147	1896 aa		11.24	□□□□□ -0.61
RRP12-215	ENST00000622320	WNT7A	O00755	349 aa		11.24	□□□□□ -0.61
RRP12-215	ENST00000622320	TNFRSF10B	O14763	440 aa		11.24	□□□□□ -0.61
RRP12-215	ENST00000622320	MARCH6	O60337	910 aa		11.24	□□□□□ -0.61
RRP12-215	ENST00000622320	CCNT1	O60563	726 aa	Known RBP	11.24	□□□□□ -0.61
RRP12-215	ENST00000622320	OPHN1	O60890	802 aa		11.24	□□□□□ -0.61
RRP12-215	ENST00000622320	LYPLA2	O95372	231 aa		11.24	□□□□□ -0.61
RRP12-215	ENST00000622320	OR4Q2	P0C623	313 aa		11.24	□□□□□ -0.61
RRP12-215	ENST00000622320	FTH1P19	P0C7X4	201 aa		11.24	□□□□□ -0.61
RRP12-215	ENST00000622320	GJB2	P29033	226 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms