RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 DHX9Q08211 1270 aaKnown RBP22.58■■□□□ 1.2
LIME1-210ENST00000621325 CYP4A22Q5TCH4 519 aa22.58■■□□□ 1.2
LIME1-210ENST00000621325 IQSEC1Q6DN90 963 aa22.58■■□□□ 1.2
LIME1-210ENST00000621325 DENND1BQ6P3S1 775 aa22.58■■□□□ 1.2
LIME1-210ENST00000621325 ZDHHC24Q6UX98 284 aa22.58■■□□□ 1.2
LIME1-210ENST00000621325 ILDR2Q71H61 639 aa22.58■■□□□ 1.2
LIME1-210ENST00000621325 EGFL6Q8IUX8 553 aa22.58■■□□□ 1.2
LIME1-210ENST00000621325 TMEM35BQ8NCS4 154 aa22.58■■□□□ 1.2
LIME1-210ENST00000621325 ATG4AQ8WYN0 398 aa22.58■■□□□ 1.2
LIME1-210ENST00000621325 LRRC45Q96CN5 670 aa22.58■■□□□ 1.2
LIME1-210ENST00000621325 TWNKQ96RR1 684 aa22.58■■□□□ 1.2
LIME1-210ENST00000621325 FAM49AQ9H0Q0 323 aaPredicted RBP22.58■■□□□ 1.2
LIME1-210ENST00000621325 TCRBV5S1A1TA0A578 114 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 LSM8O95777 96 aaKnown RBP22.57■■□□□ 1.2
LIME1-210ENST00000621325 SSR1P43307 286 aaKnown RBP22.57■■□□□ 1.2
LIME1-210ENST00000621325 RPL21P46778 160 aaKnown RBP22.57■■□□□ 1.2
LIME1-210ENST00000621325 PLTPP55058 493 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 LACTBP83111 547 aaPredicted RBP22.57■■□□□ 1.2
LIME1-210ENST00000621325 ZNF252P-AS1Q0IIN9 211 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 SNX1Q13596 522 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 TTC31Q49AM3 519 aaPredicted RBP22.57■■□□□ 1.2
LIME1-210ENST00000621325 ANKS1BQ7Z6G8 1248 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 UBLCP1Q8WVY7 318 aaPredicted RBP22.57■■□□□ 1.2
LIME1-210ENST00000621325 HEMGNQ9BXL5 484 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 BCO2Q9BYV7 579 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 CXCL16Q9H2A7 254 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 GRHL1Q9NZI5 618 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 FLRT1Q9NZU1 646 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 SLC15A5A6NIM6 579 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 H0YGN5 161 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 ERLIN2O94905 339 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.57■■□□□ 1.2
LIME1-210ENST00000621325 FBXO25Q8TCJ0 367 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 FMO2Q99518 471 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 CHST7Q9NS84 486 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 TJP2Q9UDY2 1190 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 RASAL2Q9UJF2 1139 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.57■■□□□ 1.2
LIME1-210ENST00000621325 NFS1Q9Y697 457 aa22.57■■□□□ 1.2
LIME1-210ENST00000621325 KAT6AQ92794 2004 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 A0A1B0GUA9 196 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 TMEM191CA6NGB0 347 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 IGF2BP3O00425 579 aaKnown RBP eCLIP22.56■■□□□ 1.2
LIME1-210ENST00000621325 POLR2BP30876 1174 aaKnown RBP22.56■■□□□ 1.2
LIME1-210ENST00000621325 RAD23BP54727 409 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 OGDHQ02218 1023 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 SGO2Q562F6 1265 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 CEP85LQ5SZL2 805 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 MCEEQ96PE7 176 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 KLHL11Q9NVR0 708 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 CYTH4Q9UIA0 394 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 PCDHGC3Q9UN70 934 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 ATP13A4Q4VNC1 1196 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 CCDC50Q8IVM0 306 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 CD302Q8IX05 232 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 RHOT1Q8IXI2 618 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 C12orf50Q8NA57 414 aaPredicted RBP22.56■■□□□ 1.2
LIME1-210ENST00000621325 PLVAPQ9BX97 442 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 CXorf56Q9H5V9 222 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 LRRC19Q9H756 370 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 CDHR5Q9HBB8 845 aa22.56■■□□□ 1.2
LIME1-210ENST00000621325 R3HDM2Q9Y2K5 976 aaKnown RBP22.56■■□□□ 1.2
LIME1-210ENST00000621325 CENPFP49454 3210 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 ITGBL1O95965 494 aaPredicted RBP22.55■■□□□ 1.2
LIME1-210ENST00000621325 CALB1P05937 261 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 RALAP11233 206 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 HUNKP57058 714 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 ASB7Q9H672 318 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 CWC15Q9P013 229 aaKnown RBP22.55■■□□□ 1.2
LIME1-210ENST00000621325 ATP8A1Q9Y2Q0 1164 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 EIF4BP23588 611 aaKnown RBP22.55■■□□□ 1.2
LIME1-210ENST00000621325 CDH5P33151 784 aaPredicted RBP22.55■■□□□ 1.2
LIME1-210ENST00000621325 DRG2P55039 364 aaKnown RBP22.55■■□□□ 1.2
LIME1-210ENST00000621325 TMEM132DQ14C87 1099 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 PPP1R2P3Q6NXS1 205 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 DNAJC24Q6P3W2 148 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 ERICH1Q86X53 443 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 FAM118BQ9BPY3 351 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 TXLNGYQ9BZA5 131 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 ELOVL4Q9GZR5 314 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 DONSONQ9NYP3 566 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 AGAP1Q9UPQ3 857 aa22.55■■□□□ 1.2
LIME1-210ENST00000621325 F8VP50 259 aa22.54■■□□□ 1.2
LIME1-210ENST00000621325 PSTPIP1O43586 416 aa22.54■■□□□ 1.2
LIME1-210ENST00000621325 FNTAP49354 379 aa22.54■■□□□ 1.2
LIME1-210ENST00000621325 PTPN20Q4JDL3 420 aa22.54■■□□□ 1.2
LIME1-210ENST00000621325 MORN1Q5T089 497 aa22.54■■□□□ 1.2
LIME1-210ENST00000621325 OLFML2BQ68BL8 750 aa22.54■■□□□ 1.2
LIME1-210ENST00000621325 SLC4A11Q8NBS3 891 aa22.54■■□□□ 1.2
LIME1-210ENST00000621325 KAT2BQ92831 832 aa22.54■■□□□ 1.2
LIME1-210ENST00000621325 ACAP3Q96P50 834 aa22.54■■□□□ 1.2
LIME1-210ENST00000621325 ADAMTS10Q9H324 1103 aa22.54■■□□□ 1.2
LIME1-210ENST00000621325 PODXLO00592 558 aa22.53■■□□□ 1.2
LIME1-210ENST00000621325 YWHAEP62258 255 aaKnown RBP22.53■■□□□ 1.2
LIME1-210ENST00000621325 HIC1Q14526 733 aa22.53■■□□□ 1.2
LIME1-210ENST00000621325 CCL14Q16627 93 aa22.53■■□□□ 1.2
LIME1-210ENST00000621325 HPDLQ96IR7 371 aa22.53■■□□□ 1.2
LIME1-210ENST00000621325 ZNF518BQ9C0D4 1074 aa22.53■■□□□ 1.2
LIME1-210ENST00000621325 LRRC4CQ9HCJ2 640 aa22.53■■□□□ 1.2
LIME1-210ENST00000621325 IP6K2Q9UHH9 426 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms