RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 LILRA4P59901 499 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 PRKCQQ04759 706 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 WDR44Q5JSH3 913 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 DSTYKQ6XUX3 929 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 ATAD1Q8NBU5 361 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 STKLD1Q8NE28 680 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 RASSF8Q8NHQ8 419 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 DNAJC19Q96DA6 116 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 LRRC3BQ96PB8 259 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 MKNK1Q9BUB5 465 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 CCSER1Q9C0I3 900 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 TBC1D7Q9P0N9 293 aa12.41□□□□□ -0.42
CPNE3-210ENST00000621245 EML5Q05BV3 1969 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 A0A1W2PRU2 124 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 ANO9A1A5B4 782 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 PIRO00625 290 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 HOXC13P31276 330 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 TMEM132DQ14C87 1099 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 CCDC142Q17RM4 750 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 OVOS1Q6IE37 1185 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 CENPPQ6IPU0 288 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 DCLK2Q8N568 766 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 GLIS3Q8NEA6 775 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 ZSCAN18Q8TBC5 510 aaPredicted RBP12.4□□□□□ -0.42
CPNE3-210ENST00000621245 USP28Q96RU2 1077 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 LPIN3Q9BQK8 851 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 STRA6Q9BX79 667 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 UPF2Q9HAU5 1272 aaKnown RBP12.4□□□□□ -0.42
CPNE3-210ENST00000621245 ASAH2Q9NR71 780 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 SPATA6Q9NWH7 488 aaPredicted RBP12.4□□□□□ -0.42
CPNE3-210ENST00000621245 NDRG2Q9UN36 371 aaKnown RBP12.4□□□□□ -0.42
CPNE3-210ENST00000621245 MTMR6Q9Y217 621 aa12.4□□□□□ -0.42
CPNE3-210ENST00000621245 H0YCG3 227 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 ARNTLO00327 626 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 BMP15O95972 392 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 ATF6P18850 670 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 TYMPP19971 482 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 SYT1P21579 422 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 GDI1P31150 447 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 DDIT3P35638 169 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 SOX9P48436 509 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 PFKPQ01813 784 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 GPR17Q13304 367 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 CYP4A22Q5TCH4 519 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 ADALQ6DHV7 355 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 GAREM2Q75VX8 874 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 SMARCD2Q92925 531 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 HPS3Q969F9 1004 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 SAAL1Q96ER3 474 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 SHDQ96IW2 340 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 ZNF512Q96ME7 567 aaPredicted RBP12.39□□□□□ -0.43
CPNE3-210ENST00000621245 AGO2Q9UKV8 859 aaKnown RBP12.39□□□□□ -0.43
CPNE3-210ENST00000621245 ADGRG1Q9Y653 693 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 STYXL1Q9Y6J8 313 aa12.39□□□□□ -0.43
CPNE3-210ENST00000621245 OR6C75A6NL08 312 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 HEPACAM2A8MVW5 462 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 ZNF197O14709 1029 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 HCRTO43612 131 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 PRAMEF12O95522 483 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 LMNAP02545 664 aaKnown RBP12.38□□□□□ -0.43
CPNE3-210ENST00000621245 ODC1P11926 461 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 CYP4F8P98187 520 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 MTAPQ13126 283 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 SLC39A12Q504Y0 691 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 C6orf132Q5T0Z8 1188 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 WSCD1Q658N2 575 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 IQCEQ6IPM2 695 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 ZNF720Q7Z2F6 126 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 USP37Q86T82 979 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 LRRTM3Q86VH5 581 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 ELMOD1Q8N336 334 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 SUMF1Q8NBK3 374 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 KCNG4Q8TDN1 519 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 CLDN23Q96B33 292 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 BORCS6Q96GS4 357 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 ZFYVE19Q96K21 471 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 BCO2Q9BYV7 579 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 PANK2Q9BZ23 570 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 SMG9Q9H0W8 520 aaKnown RBP12.38□□□□□ -0.43
CPNE3-210ENST00000621245 ST6GALNAC4Q9H4F1 302 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 BRD9Q9H8M2 597 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 ZFP14Q9HCL3 533 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 TMLHEQ9NVH6 421 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 KCNG1Q9UIX4 513 aa12.38□□□□□ -0.43
CPNE3-210ENST00000621245 SRPRBQ9Y5M8 271 aaKnown RBP12.38□□□□□ -0.43
CPNE3-210ENST00000621245 PTPRJQ12913 1337 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 NCOR2Q9Y618 2525 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 GOLGA8IPA6NC78 632 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 GOLGA8JA6NMD2 632 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 MICAL2O94851 1124 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 CYP11A1P05108 521 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 TDGF1P13385 188 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 GPR15P49685 360 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 CSTF1Q05048 431 aaKnown RBP12.37□□□□□ -0.43
CPNE3-210ENST00000621245 MYBPC2Q14324 1141 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 GAS6Q14393 721 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 KYAT1Q16773 422 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 TTC8Q8TAM2 541 aa12.37□□□□□ -0.43
CPNE3-210ENST00000621245 CXorf38Q8TB03 319 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms