RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 PIK3R5Q8WYR1 880 aa11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 MRPL38Q96DV4 380 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 NT5C1BQ96P26 610 aa11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 KLHL5Q96PQ7 755 aa11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 CDX2Q99626 313 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 LPIN3Q9BQK8 851 aa11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 CLSTN3Q9BQT9 956 aa11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 LSM14BQ9BX40 385 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 BCO2Q9BYV7 579 aa11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 IMPG2Q9BZV3 1241 aa11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 NIF3L1Q9GZT8 377 aa11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 RTN4Q9NQC3 1192 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 MRPL17Q9NRX2 175 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 DDX43Q9NXZ2 648 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 IFNKQ9P0W0 207 aa11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 HMGXB4Q9UGU5 601 aa11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 SIK3Q9Y2K2 1263 aa11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 MTCH2Q9Y6C9 303 aa11.71□□□□□ -0.53
POLR2J3-221ENST00000621093 PRRC2BQ5JSZ5 2229 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 A0A1B0GTH6 734 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 GTPBP10A4D1E9 387 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 PER2O15055 1255 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 TEX28O15482 410 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 TBC1D4O60343 1298 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 ATP2C2O75185 946 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 CNPP09543 421 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 PDGFRBP09619 1106 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 CD58P19256 250 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 WARSP23381 471 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 PAX3P23760 479 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 GTF2F1P35269 517 aaKnown RBP eCLIP11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 ARPP19P56211 112 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 UBASH3AP57075 661 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 YWHAHQ04917 246 aaPredicted RBP11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 CETN1Q12798 172 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 CUL2Q13617 745 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 NR1I3Q14994 352 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 FKBP15Q5T1M5 1219 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 GPR153Q6NV75 609 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 RBM23Q86U06 439 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 METTL23Q86XA0 190 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 PPM1KQ8N3J5 372 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 MRPL43Q8N983 215 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 OR6B3Q8NGW1 331 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 KREMEN1Q96MU8 473 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 TWNKQ96RR1 684 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 ANP32EQ9BTT0 268 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 DPEP3Q9H4B8 488 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 RXFP1Q9HBX9 757 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 UBE2TQ9NPD8 197 aaPredicted RBP11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 MTMR10Q9NXD2 777 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 MTRRQ9UBK8 725 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 FBXL5Q9UKA1 691 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 CDY1Q9Y6F8 540 aa11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 LAMA2P24043 3122 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-221ENST00000621093 CHD7Q9P2D1 2997 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 GABRDO14764 452 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 EPHB6O15197 1021 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 CLASP2O75122 1294 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 TACC1O75410 805 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 NOL4O94818 638 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 OAZ2O95190 189 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 CALCAP01258 141 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 P4HA1P13674 534 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 OR1D2P34982 312 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 PSMC1P62191 440 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 RBM10P98175 930 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 PLCB2Q00722 1185 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 PTPROQ16827 1216 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 ARHGAP44Q17R89 818 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 FILIP1LQ4L180 1135 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 TCEAL5Q5H9L2 206 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 IQCEQ6IPM2 695 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 ZNF280DQ6N043 979 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 ANKS3Q6ZW76 656 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 DPH6Q7L8W6 267 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 LRRTM3Q86VH5 581 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 PALB2Q86YC2 1186 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 TMEM86AQ8N2M4 240 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 MICALL1Q8N3F8 863 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 UBR7Q8N806 425 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 WHAMMQ8TF30 809 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 PCMTD1Q96MG8 357 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 XPO4Q9C0E2 1151 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 SNX25Q9H3E2 840 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 NGRNQ9NPE2 291 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 TMLHEQ9NVH6 421 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 DSEQ9UL01 958 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 BACE2Q9Y5Z0 518 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 FHOD1Q9Y613 1164 aa11.69□□□□□ -0.54
POLR2J3-221ENST00000621093 ARHGEF37A1IGU5 675 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 A8MXQ7 604 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 H7C4K7 107 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 SPATA31D3P0C874 917 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 PNMA6AP0CW24 399 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 ACO1P21399 889 aaKnown RBP11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 GNL1P36915 607 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 NRIP1P48552 1158 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 NDST1P52848 882 aa11.68□□□□□ -0.54
POLR2J3-221ENST00000621093 ROR1Q01973 937 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms