RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 COG5Q9UP83 839 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 CUL9Q8IWT3 2517 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 PMM2O15305 246 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 DDHD2O94830 711 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 GALTP07902 379 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 SCNN1GP51170 649 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 VPS36Q86VN1 386 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 SLC39A11Q8N1S5 342 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 OSBPL9Q96SU4 736 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.06■■□□□ 1.28
SGMS1-210ENST00000619438 IGFLR1Q9H665 355 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 INTUQ9ULD6 942 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 LZTS1Q9Y250 596 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 FAN1Q9Y2M0 1017 aa23.06■■□□□ 1.28
SGMS1-210ENST00000619438 MYO7AQ13402 2215 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 PLXNA4Q9HCM2 1894 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 N4BP1O75113 896 aaKnown RBP23.05■■□□□ 1.28
SGMS1-210ENST00000619438 KRT13P13646 458 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 IRS1P35568 1242 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 ZNF568Q3ZCX4 644 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 BEND6Q5SZJ8 279 aaPredicted RBP23.05■■□□□ 1.28
SGMS1-210ENST00000619438 TAS1R3Q7RTX0 852 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 ZBTB33Q86T24 672 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 GPIHBP1Q8IV16 184 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 ATXN2LQ8WWM7 1075 aaKnown RBP23.05■■□□□ 1.28
SGMS1-210ENST00000619438 BICD1Q96G01 975 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 TLR10Q9BXR5 811 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 UBXN6Q9BZV1 441 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 INTS2Q9H0H0 1204 aaKnown RBP23.05■■□□□ 1.28
SGMS1-210ENST00000619438 MIOSQ9NXC5 875 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 NAGPAQ9UK23 515 aa23.05■■□□□ 1.28
SGMS1-210ENST00000619438 AJAP1Q9UKB5 411 aaPredicted RBP23.05■■□□□ 1.28
SGMS1-210ENST00000619438 PDE2AO00408 941 aaPredicted RBP23.04■■□□□ 1.28
SGMS1-210ENST00000619438 RHOXF2BP0C7M4 288 aa23.04■■□□□ 1.28
SGMS1-210ENST00000619438 MATR3P43243 847 aaKnown RBP eCLIP23.04■■□□□ 1.285e-7■■■□□ 16.3
SGMS1-210ENST00000619438 PLA2G4AP47712 749 aa23.04■■□□□ 1.28
SGMS1-210ENST00000619438 MYL7Q01449 175 aa23.04■■□□□ 1.28
SGMS1-210ENST00000619438 CBWD6Q4V339 395 aa23.04■■□□□ 1.28
SGMS1-210ENST00000619438 CBWD3Q5JTY5 395 aa23.04■■□□□ 1.28
SGMS1-210ENST00000619438 CBWD5Q5RIA9 395 aa23.04■■□□□ 1.28
SGMS1-210ENST00000619438 TMC7Q7Z402 723 aa23.04■■□□□ 1.28
SGMS1-210ENST00000619438 RUBCNQ92622 972 aa23.04■■□□□ 1.28
SGMS1-210ENST00000619438 RHOXF2Q9BQY4 288 aa23.04■■□□□ 1.28
SGMS1-210ENST00000619438 ENTPD7Q9NQZ7 604 aa23.04■■□□□ 1.28
SGMS1-210ENST00000619438 APEX2Q9UBZ4 518 aa23.04■■□□□ 1.28
SGMS1-210ENST00000619438 EXOC7Q9UPT5 735 aa23.04■■□□□ 1.28
SGMS1-210ENST00000619438 MAP2K7O14733 419 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 ZNF185O15231 689 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 SOX5P35711 763 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 OR1G1P47890 313 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 SLC11A1P49279 550 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 ERVFC1P60507 584 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 MRPS5P82675 430 aaKnown RBP23.03■■□□□ 1.28
SGMS1-210ENST00000619438 TFF2Q03403 129 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 GABPB1Q06547 395 aaPredicted RBP23.03■■□□□ 1.28
SGMS1-210ENST00000619438 AAK1Q2M2I8 961 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 PDE12Q6L8Q7 609 aaKnown RBP23.03■■□□□ 1.28
SGMS1-210ENST00000619438 RBM23Q86U06 439 aaKnown RBP23.03■■□□□ 1.28
SGMS1-210ENST00000619438 MMGT1Q8N4V1 131 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 XXYLT1Q8NBI6 393 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 CAPZA3Q96KX2 299 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 TCF25Q9BQ70 676 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 TMEM175Q9BSA9 504 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 MYH10P35580 1976 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 BRWD1Q9NSI6 2320 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 F8VZ95 297 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 DLL1O00548 723 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 NCK2O43639 380 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 SASH3O75995 380 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 CCDC172P0C7W6 258 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 SCP2P22307 547 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 CA8P35219 290 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 VSNL1P62760 191 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 IFI16Q16666 785 aaKnown RBP23.03■■□□□ 1.28
SGMS1-210ENST00000619438 IGSF21Q96ID5 467 aa23.03■■□□□ 1.28
SGMS1-210ENST00000619438 A0A0A6YYK5 440 aaPredicted RBP23.02■■□□□ 1.28
SGMS1-210ENST00000619438 NRP1O14786 923 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 INPPL1O15357 1258 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 RECQL4O94761 1208 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 HARSP12081 509 aaKnown RBP23.02■■□□□ 1.28
SGMS1-210ENST00000619438 YARSP54577 528 aaKnown RBP23.02■■□□□ 1.28
SGMS1-210ENST00000619438 OSTNP61366 133 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 PLPP4Q5VZY2 271 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 ALKBH5Q6P6C2 394 aaKnown RBP23.02■■□□□ 1.28
SGMS1-210ENST00000619438 MPZL3Q6UWV2 235 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 MAP4K3Q8IVH8 894 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 LMO3Q8TAP4 145 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 TLE6Q9H808 572 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 NGRNQ9NPE2 291 aaKnown RBP23.02■■□□□ 1.28
SGMS1-210ENST00000619438 HSPBP1Q9NZL4 362 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 ANKFY1Q9P2R3 1169 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 DNAJC12Q9UKB3 198 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 L1RE1Q9UN81 338 aa23.02■■□□□ 1.28
SGMS1-210ENST00000619438 CLDN3O15551 220 aa23.01■■□□□ 1.27
SGMS1-210ENST00000619438 BUB1O43683 1085 aa23.01■■□□□ 1.27
SGMS1-210ENST00000619438 TOM1L1O75674 476 aa23.01■■□□□ 1.27
SGMS1-210ENST00000619438 TRIM49P0CI25 452 aa23.01■■□□□ 1.27
SGMS1-210ENST00000619438 TRIM49CP0CI26 452 aa23.01■■□□□ 1.27
SGMS1-210ENST00000619438 ABCD1P33897 745 aa23.01■■□□□ 1.27
SGMS1-210ENST00000619438 VAMP7P51809 220 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms