RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 PRMT7Q9NVM4 692 aaPredicted RBP14.6□□□□□ -0.07
CNOT3-210ENST00000618939 ANKRD63C9JTQ0 380 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 SCTRP47872 440 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 ITIH4Q14624 930 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 CCDC68Q9H2F9 335 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 ACP6Q9NPH0 428 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 NCANO14594 1321 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 MX2P20592 715 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 DBN1Q16643 649 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 EFCAB12Q6NXP0 572 aa14.6□□□□□ -0.07
CNOT3-210ENST00000618939 GOLGA8QA0A0J9YX86 632 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 GOLGA8OA6NCC3 632 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 GOLGA8NF8WBI6 632 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
CNOT3-210ENST00000618939 KPNA2P52292 529 aaKnown RBP14.59□□□□□ -0.07
CNOT3-210ENST00000618939 RAD23BP54727 409 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 MCL1Q07820 350 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 AP1B1Q10567 949 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 PTK7Q13308 1070 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 NBPF12Q5TAG4 269 aaPredicted RBP14.59□□□□□ -0.07
CNOT3-210ENST00000618939 AADACL2Q6P093 401 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 FAM71DQ8N9W8 422 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 HES6Q96HZ4 224 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 NT5C1AQ9BXI3 368 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 DNAJC18Q9H819 358 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 BFARQ9NZS9 450 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 WNT10BO00744 389 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 CTCFP49711 727 aaPredicted RBP14.59□□□□□ -0.07
CNOT3-210ENST00000618939 SMAD1Q15797 465 aaKnown RBP14.59□□□□□ -0.07
CNOT3-210ENST00000618939 TFDP3Q5H9I0 405 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 AGGF1Q8N302 714 aaeCLIP14.59□□□□□ -0.072e-6■■□□□ 11.9
CNOT3-210ENST00000618939 IKZF4Q9H2S9 585 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 PAK5Q9P286 719 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 COL1A1P02452 1464 aaPredicted RBP14.59□□□□□ -0.07
CNOT3-210ENST00000618939 IGF2BP3O00425 579 aaKnown RBP eCLIP14.59□□□□□ -0.07
CNOT3-210ENST00000618939 MAGEB2O15479 319 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 GAS2O43903 313 aaKnown RBP14.59□□□□□ -0.07
CNOT3-210ENST00000618939 HBP1O60381 514 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 LCP1P13796 627 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 IFI35P80217 286 aaPredicted RBP14.59□□□□□ -0.07
CNOT3-210ENST00000618939 SEPT6Q14141 434 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 SLC35G1Q2M3R5 365 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 TAF1BQ53T94 588 aaPredicted RBP14.59□□□□□ -0.07
CNOT3-210ENST00000618939 EFHC2Q5JST6 749 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 FKBP1CQ5VVH2 108 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 RWDD4Q6NW29 188 aaKnown RBP14.59□□□□□ -0.07
CNOT3-210ENST00000618939 UBA3Q8TBC4 463 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 PGM2Q96G03 612 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 FAM161BQ96MY7 647 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 DCLK3Q9C098 648 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 FAM96AQ9H5X1 160 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 UBN1Q9NPG3 1134 aa14.59□□□□□ -0.07
CNOT3-210ENST00000618939 SMIM24O75264 130 aa14.58□□□□□ -0.07
CNOT3-210ENST00000618939 GPD1P21695 349 aa14.58□□□□□ -0.07
CNOT3-210ENST00000618939 FASTKD5Q7L8L6 764 aaKnown RBP14.58□□□□□ -0.07
CNOT3-210ENST00000618939 RPAINQ86UA6 219 aa14.58□□□□□ -0.07
CNOT3-210ENST00000618939 IQCKQ8N0W5 287 aa14.58□□□□□ -0.07
CNOT3-210ENST00000618939 FAM193BQ96PV7 902 aaPredicted RBP14.58□□□□□ -0.07
CNOT3-210ENST00000618939 WWP1Q9H0M0 922 aa14.58□□□□□ -0.07
CNOT3-210ENST00000618939 H3BRJ5 948 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 VWA5AO00534 786 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 SPAG6O75602 509 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 ITGB5P18084 799 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 CLK2P49760 499 aaKnown RBP14.58□□□□□ -0.08
CNOT3-210ENST00000618939 GEMIN4P57678 1058 aaKnown RBP14.58□□□□□ -0.08
CNOT3-210ENST00000618939 SESN2P58004 480 aaPredicted RBP14.58□□□□□ -0.08
CNOT3-210ENST00000618939 GTF2BQ00403 316 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 C1QBPQ07021 282 aaKnown RBP14.58□□□□□ -0.08
CNOT3-210ENST00000618939 TRADDQ15628 312 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 KCNT1Q5JUK3 1230 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 MCUQ8NE86 351 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 ZNF560Q96MR9 790 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 AVENQ9NQS1 362 aaPredicted RBP14.58□□□□□ -0.08
CNOT3-210ENST00000618939 CISHQ9NSE2 258 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 USP20Q9Y2K6 914 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 ITGB3P05106 788 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 TYK2P29597 1187 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 MYL6P60660 151 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 GPR162Q16538 588 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 ZNF518BQ9C0D4 1074 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 FIS1Q9Y3D6 152 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 PLIN4Q96Q06 1357 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 IGKV6D-41A0A0C4DH26 115 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 ADRB2P07550 413 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 COPS2P61201 443 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 SH2D4BQ5SQS7 431 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 HIPK4Q8NE63 616 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 HPDLQ96IR7 371 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 FAM49BQ9NUQ9 324 aa14.58□□□□□ -0.08
CNOT3-210ENST00000618939 DUOX1Q9NRD9 1551 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 TRAPPC3O43617 180 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 HNRNPCL1O60812 293 aaKnown RBP14.57□□□□□ -0.08
CNOT3-210ENST00000618939 CCDC22O60826 627 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 NME3Q13232 169 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 ITGB3BPQ13352 177 aaPredicted RBP14.57□□□□□ -0.08
CNOT3-210ENST00000618939 SPDYCQ5MJ68 293 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 C1orf146Q5VVC0 180 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 SPOCD1Q6ZMY3 1216 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 PID1Q7Z2X4 250 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 GLIS2Q9BZE0 524 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms