RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 TMEM86AQ8N2M4 240 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 PDCL2Q8N4E4 241 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 KBTBD7Q8WVZ9 684 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 KHSRPQ92945 711 aaKnown RBP eCLIP8.88□□□□□ -0.99
NEK3-209ENST00000618856 CCDC127Q96BQ5 260 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 HPDLQ96IR7 371 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 FNBP1Q96RU3 617 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 ACBD6Q9BR61 282 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 CRISPLD1Q9H336 500 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 KIAA1468Q9P260 1216 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 NOTCH4Q99466 2003 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 PI4K2BG5E9Z4 385 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 SLC16A3O15427 465 aaKnown RBP8.87□□□□□ -0.99
NEK3-209ENST00000618856 N4BP1O75113 896 aaKnown RBP8.87□□□□□ -0.99
NEK3-209ENST00000618856 TACC1O75410 805 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 MICAL2O94851 1124 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 WEE2P0C1S8 567 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 DLATP10515 647 aaKnown RBP8.87□□□□□ -0.99
NEK3-209ENST00000618856 TNNI1P19237 187 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 CCNE1P24864 410 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 GTF2H1P32780 548 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 PSMC2P35998 433 aaKnown RBP8.87□□□□□ -0.99
NEK3-209ENST00000618856 EPHA5P54756 1037 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 FKBP3Q00688 224 aaKnown RBP8.87□□□□□ -0.99
NEK3-209ENST00000618856 BFSP1Q12934 665 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 MYO1EQ12965 1108 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 LIN9Q5TKA1 542 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 WSCD1Q658N2 575 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 TTI2Q6NXR4 508 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 FAM171BQ6P995 826 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 CCDC149Q6ZUS6 474 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 SV2AQ7L0J3 742 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 USP37Q86T82 979 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 LRRTM3Q86VH5 581 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 FAM186BQ8IYM0 893 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 SLC7A14Q8TBB6 771 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 C2orf15Q8WU43 125 aaKnown RBP8.87□□□□□ -0.99
NEK3-209ENST00000618856 TMEM209Q96SK2 561 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 DUSP9Q99956 384 aaKnown RBP8.87□□□□□ -0.99
NEK3-209ENST00000618856 APOL5Q9BWW9 433 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 CLSTN2Q9H4D0 955 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 EPS15L1Q9UBC2 864 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 FRMD4BQ9Y2L6 1034 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 NME7Q9Y5B8 376 aa8.87□□□□□ -0.99
NEK3-209ENST00000618856 CLUHO75153 1309 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 MTMR11A4FU01 709 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 CETN3O15182 167 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 PMM2O15305 246 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 HUS1O60921 280 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 ASS1P00966 412 aaKnown RBP8.86□□□□□ -0.99
NEK3-209ENST00000618856 OR4Q2P0C623 313 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 WARSP23381 471 aaKnown RBP8.86□□□□□ -0.99
NEK3-209ENST00000618856 LHX1P48742 406 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 VAMP7P51809 220 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 MARSP56192 900 aaKnown RBP8.86□□□□□ -0.99
NEK3-209ENST00000618856 MYL6P60660 151 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 PPP3CAQ08209 521 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 ADCY1Q08828 1119 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 NCOA4Q13772 614 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 PPM1LQ5SGD2 360 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 CEP135Q66GS9 1140 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 RBM43Q6ZSC3 357 aaKnown RBP8.86□□□□□ -0.99
NEK3-209ENST00000618856 OSTM1Q86WC4 334 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 METTL23Q86XA0 190 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 RNF135Q8IUD6 432 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 THEM5Q8N1Q8 247 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 GPT2Q8TD30 523 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 NOC3LQ8WTT2 800 aaKnown RBP8.86□□□□□ -0.99
NEK3-209ENST00000618856 SMG7Q92540 1137 aaKnown RBP8.86□□□□□ -0.99
NEK3-209ENST00000618856 TAF4BQ92750 862 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 SYAP1Q96A49 352 aaPredicted RBP8.86□□□□□ -0.99
NEK3-209ENST00000618856 FAXDC2Q96IV6 333 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 CEP63Q96MT8 703 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 GBP4Q96PP9 640 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 MED15Q96RN5 788 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 LRRC3Q9BY71 257 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 DNMT3BQ9UBC3 853 aaKnown RBP8.86□□□□□ -0.99
NEK3-209ENST00000618856 COQ4Q9Y3A0 265 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 NR2E1Q9Y466 385 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 INSL5Q9Y5Q6 135 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 SNX9Q9Y5X1 595 aa8.86□□□□□ -0.99
NEK3-209ENST00000618856 TRIM49BA6NDI0 452 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 C2CD4DB7Z1M9 353 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 ANHXE9PGG2 379 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 PSMA7O14818 248 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 XYLBO75191 536 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 KRT19P08727 400 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 DUSP4Q13115 394 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 SGSM1Q2NKQ1 1148 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 CFAP221Q4G0U5 840 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 INTS6LQ5JSJ4 861 aaKnown RBP8.85□□□□□ -0.99
NEK3-209ENST00000618856 PRSS36Q5K4E3 855 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 OTOP3Q7RTS5 596 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 GRASPQ7Z6J2 395 aaPredicted RBP8.85□□□□□ -0.99
NEK3-209ENST00000618856 FRMD5Q7Z6J6 570 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 FILIP1Q7Z7B0 1213 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 ADGRF2Q8IZF7 708 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 PLCD3Q8N3E9 789 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 SPPL2BQ8TCT7 592 aa8.85□□□□□ -0.99
NEK3-209ENST00000618856 RPGRIP1Q96KN7 1286 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms