RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 TOMM70O94826 608 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 MTMR1Q13613 665 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 MDH1BQ5I0G3 518 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 MARK2Q7KZI7 788 aaKnown RBP10.73□□□□□ -0.69
CUL4A-212ENST00000617546 LPCAT2Q7L5N7 544 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 ILDR1Q86SU0 546 aaPredicted RBP10.73□□□□□ -0.69
CUL4A-212ENST00000617546 GALNT4Q8N4A0 578 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 CYGBQ8WWM9 190 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 ASAP1Q9ULH1 1129 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 TFR2Q9UP52 801 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 LZTS1Q9Y250 596 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 AFF2P51816 1311 aa10.73□□□□□ -0.69
CUL4A-212ENST00000617546 NPHP4O75161 1426 aaPredicted RBP10.72□□□□□ -0.69
CUL4A-212ENST00000617546 TNS3Q68CZ2 1445 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 NMT2O60551 498 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 PPP6R3Q5H9R7 873 aaPredicted RBP10.72□□□□□ -0.69
CUL4A-212ENST00000617546 SLC26A11Q86WA9 606 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 NDUFAF2Q8N183 169 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 COPG2Q9UBF2 871 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 RABGEF1Q9UJ41 708 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 ZMYND8Q9ULU4 1186 aaPredicted RBP10.72□□□□□ -0.69
CUL4A-212ENST00000617546 TBKBP1A7MCY6 615 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 PI4K2BG5E9Z4 385 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 XPO1O14980 1071 aaKnown RBP10.72□□□□□ -0.69
CUL4A-212ENST00000617546 KCNN4O15554 427 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 MTSS1O43312 755 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 POLBP06746 335 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 ATP6V1B1P15313 513 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 RFC5P40937 340 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 PRAMEP78395 509 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 GRB10Q13322 594 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 PDAP1Q13442 181 aaKnown RBP10.72□□□□□ -0.69
CUL4A-212ENST00000617546 PTK6Q13882 451 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 QRICH1Q2TAL8 776 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 MTERF2Q49AM1 385 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 NMD3Q96D46 503 aaKnown RBP10.72□□□□□ -0.69
CUL4A-212ENST00000617546 OXNAD1Q96HP4 312 aaPredicted RBP10.72□□□□□ -0.69
CUL4A-212ENST00000617546 APPL1Q9UKG1 709 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 INO80B-WBP1J3KQ70 363 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 NPTXRO95502 500 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 STAT3P40763 770 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 EFNA5P52803 228 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 RAB15P59190 212 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 ZNF507Q8TCN5 953 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 TMA16Q96EY4 203 aaKnown RBP10.72□□□□□ -0.69
CUL4A-212ENST00000617546 INO80BQ9C086 356 aaPredicted RBP10.72□□□□□ -0.69
CUL4A-212ENST00000617546 NRDE2Q9H7Z3 1164 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 CD209Q9NNX6 404 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 SLC5A4Q9NY91 659 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 IVNS1ABPQ9Y6Y0 642 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 TRIM49D1C9J1S8 452 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 USP17L10C9JJH3 530 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 USP1O94782 785 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 RALAP11233 206 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 HADHAP40939 763 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 CHN2P52757 468 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 EFHC2Q5JST6 749 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 FLAD1Q8NFF5 587 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 RMDN1Q96DB5 314 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 STN1Q9H668 368 aaKnown RBP10.72□□□□□ -0.69
CUL4A-212ENST00000617546 RAB6BQ9NRW1 208 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 MINPP1Q9UNW1 487 aa10.72□□□□□ -0.69
CUL4A-212ENST00000617546 DDX5P17844 614 aaKnown RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 TROAPQ12815 778 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 NAB1Q13506 487 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 DUOXA2Q1HG44 320 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 FASTKD1Q53R41 847 aaKnown RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 PRMT9Q6P2P2 845 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 ZNF571Q7Z3V5 609 aaPredicted RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 DCLK2Q8N568 766 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 HDAC7Q8WUI4 952 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 FAM111AQ96PZ2 611 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 ZNF518BQ9C0D4 1074 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 PLGRKTQ9HBL7 147 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 CIDEBQ9UHD4 219 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 PCYOX1Q9UHG3 505 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 SKAP2O75563 359 aaPredicted RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 PRKCIP41743 596 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 KCNJ1P48048 391 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 OASLQ15646 514 aaKnown RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 IQCKQ8N0W5 287 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 KLHL23Q8NBE8 558 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 PPHLN1Q8NEY8 458 aaKnown RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 CALML6Q8TD86 181 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 GDPD5Q8WTR4 605 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 MRPL4Q9BYD3 311 aaKnown RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 SEMA4AQ9H3S1 761 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 C17orf75Q9HAS0 396 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 PCDH9Q9HC56 1237 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 PPRC1Q5VV67 1664 aaKnown RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 A0A087WXM4 84 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 M0QYV0 167 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 NMT1P30419 496 aaKnown RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 MAPK6Q16659 721 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 CDO1Q16878 200 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 NT5DC3Q86UY8 548 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 CLEC4FQ8N1N0 589 aa10.71□□□□□ -0.69
CUL4A-212ENST00000617546 PSPC1Q8WXF1 523 aaKnown RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 NSUN4Q96CB9 384 aaKnown RBP10.71□□□□□ -0.69
CUL4A-212ENST00000617546 APOPT1Q96IL0 206 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms