RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 SLC10A6Q3KNW5 377 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 ZNF394Q53GI3 561 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 LRRC38Q5VT99 294 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 SCARA5Q6ZMJ2 495 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 RUFY4Q6ZNE9 571 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 CPB2Q96IY4 423 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 PTPN18Q99952 460 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 SLC5A4Q9NY91 659 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 NXF1Q9UBU9 619 aaKnown RBP16.68■□□□□ 0.26
NR1H3-235ENST00000616973 MTRF1LQ9UGC7 380 aaKnown RBP16.68■□□□□ 0.26
NR1H3-235ENST00000616973 STRIP2Q9ULQ0 834 aa16.68■□□□□ 0.26
NR1H3-235ENST00000616973 PDCD11Q14690 1871 aaKnown RBP16.67■□□□□ 0.26
NR1H3-235ENST00000616973 A0A1B0GUA9 196 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 RRN3P2A6NIE6 340 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 STAU1O95793 577 aaKnown RBP16.67■□□□□ 0.26
NR1H3-235ENST00000616973 PLTPP55058 493 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 EIF3BP55884 814 aaKnown RBP16.67■□□□□ 0.26
NR1H3-235ENST00000616973 ZNF844Q08AG5 666 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 DNAJC24Q6P3W2 148 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 KDM7AQ6ZMT4 941 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 ERICH1Q86X53 443 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 KIAA0319LQ8IZA0 1049 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 C3orf20Q8ND61 904 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 NPLOC4Q8TAT6 608 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 FBXO25Q8TCJ0 367 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 GRK7Q8WTQ7 553 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 NLRP7Q8WX94 980 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 ART4Q93070 314 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 DCLK3Q9C098 648 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 FEZ2Q9UHY8 353 aaPredicted RBP16.67■□□□□ 0.26
NR1H3-235ENST00000616973 ZHX1Q9UKY1 873 aaPredicted RBP16.67■□□□□ 0.26
NR1H3-235ENST00000616973 C2CD2Q9Y426 696 aa16.67■□□□□ 0.26
NR1H3-235ENST00000616973 CSDE1O75534 798 aaKnown RBP16.66■□□□□ 0.26
NR1H3-235ENST00000616973 MYZAPP0CAP1 466 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 RAD23BP54727 409 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 GSCP56915 257 aaPredicted RBP16.66■□□□□ 0.26
NR1H3-235ENST00000616973 RPL7AP62424 266 aaKnown RBP16.66■□□□□ 0.26
NR1H3-235ENST00000616973 CDC42EP1Q00587 391 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 ZSCAN26Q16670 478 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 WDR72Q3MJ13 1102 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 AGBL2Q5U5Z8 902 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 NIPA2Q8N8Q9 360 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 TRPM7Q96QT4 1865 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 CAPS2Q9BXY5 557 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 SDCBP2Q9H190 292 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 DOCK3Q8IZD9 2030 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 ITGB3P05106 788 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 NUDT17P0C025 328 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 P4HA1P13674 534 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 POLR2BP30876 1174 aaKnown RBP16.66■□□□□ 0.26
NR1H3-235ENST00000616973 CETN2P41208 172 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 KCNJ1P48048 391 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 PMS2P54278 862 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 ZNF252P-AS1Q0IIN9 211 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 PIGHQ14442 188 aaPredicted RBP16.66■□□□□ 0.26
NR1H3-235ENST00000616973 TMEM132DQ14C87 1099 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 CCNG2Q16589 344 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 RCOR2Q8IZ40 523 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 C1orf54Q8WWF1 131 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 ACAP3Q96P50 834 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 ADPGKQ9BRR6 497 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 HERPUD2Q9BSE4 406 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 PABPC3Q9H361 631 aaKnown RBP16.66■□□□□ 0.26
NR1H3-235ENST00000616973 WHRNQ9P202 907 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 ITGA11Q9UKX5 1188 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 ATP8A1Q9Y2Q0 1164 aa16.66■□□□□ 0.26
NR1H3-235ENST00000616973 IVLP07476 585 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 RALAP11233 206 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 GRM5P41594 1212 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 PTK6Q13882 451 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 KCTD19Q17RG1 926 aaPredicted RBP16.65■□□□□ 0.26
NR1H3-235ENST00000616973 DCAF4L1Q3SXM0 396 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 KCTD16Q68DU8 428 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 DENND1BQ6P3S1 775 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 LRRC31Q6UY01 552 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 CCDC50Q8IVM0 306 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 TTC39CQ8N584 583 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 ATL2Q8NHH9 583 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 RBM41Q96IZ5 413 aaKnown RBP16.65■□□□□ 0.26
NR1H3-235ENST00000616973 PPP1R16BQ96T49 567 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 OSBPL8Q9BZF1 889 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 CHST7Q9NS84 486 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 CALCOCO1Q9P1Z2 691 aa16.65■□□□□ 0.26
NR1H3-235ENST00000616973 A6NJR5 290 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 O00370 1275 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 CILPO75339 1184 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 CELF2O95319 508 aaKnown RBP16.64■□□□□ 0.26
NR1H3-235ENST00000616973 GJB6O95452 261 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 RAP1GAPP47736 663 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 IRAK1P51617 712 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 HNRNPH2P55795 449 aaKnown RBP16.64■□□□□ 0.26
NR1H3-235ENST00000616973 COPS2P61201 443 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 KRT17Q04695 432 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 SLMAPQ14BN4 828 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 PPP1R7Q15435 360 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 MORN1Q5T089 497 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 DAB2IPQ5VWQ8 1189 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 DCUN1D2Q6PH85 259 aa16.64■□□□□ 0.26
NR1H3-235ENST00000616973 APBB1IPQ7Z5R6 666 aaPredicted RBP16.64■□□□□ 0.26
NR1H3-235ENST00000616973 SH2D3CQ8N5H7 860 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms