RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 Q6ZNX1 250 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 PRIMA1Q86XR5 153 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 IL17RDQ8NFM7 739 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 NUP133Q8WUM0 1156 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 CLPTM1LQ96KA5 538 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 PRKRIP1Q9H875 184 aaPredicted RBP4.49□□□□□ -1.69
CBWD1-224ENST00000616803 MANSC1Q9H8J5 431 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 GALNT9Q9HCQ5 603 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 IL17RBQ9NRM6 502 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 TDP1Q9NUW8 608 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 KCNE5Q9UJ90 142 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 AGAP1Q9UPQ3 857 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 TRPM2O94759 1503 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 PRDM15P57071 1507 aaPredicted RBP4.49□□□□□ -1.69
CBWD1-224ENST00000616803 ROCK2O75116 1388 aaKnown RBP4.49□□□□□ -1.69
CBWD1-224ENST00000616803 MROH1Q8NDA8 1641 aa4.49□□□□□ -1.69
CBWD1-224ENST00000616803 CCDC144AA2RUR9 1427 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 PTPRTO14522 1441 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 ATP7AQ04656 1500 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 MADDQ8WXG6 1647 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 LRRC3CA6NJW4 275 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 F2RL2O00254 374 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 SLC43A1O75387 559 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 SUN1O94901 812 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 RHOBTB3O94955 611 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 HLA-DOAP06340 250 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 FDXRP22570 491 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 CXCR5P32302 372 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 PHKA1P46020 1223 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 CDC42EP1Q00587 391 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 COLEC12Q5KU26 742 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 TMPRSS9Q7Z410 1059 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 ADGRG3Q86Y34 549 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 SLC30A5Q8TAD4 765 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 SSH3Q8TE77 659 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 NSUN6Q8TEA1 469 aaKnown RBP4.48□□□□□ -1.69
CBWD1-224ENST00000616803 LPIN2Q92539 896 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 PTCD3Q96EY7 689 aaKnown RBP4.48□□□□□ -1.69
CBWD1-224ENST00000616803 SMAD5Q99717 465 aaKnown RBP4.48□□□□□ -1.69
CBWD1-224ENST00000616803 TESQ9UGI8 421 aaKnown RBP4.48□□□□□ -1.69
CBWD1-224ENST00000616803 MTO1Q9Y2Z2 717 aaKnown RBP4.48□□□□□ -1.69
CBWD1-224ENST00000616803 NOX1Q9Y5S8 564 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 IQGAP1P46940 1657 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 KIDINS220Q9ULH0 1771 aa4.48□□□□□ -1.69
CBWD1-224ENST00000616803 IFT172Q9UG01 1749 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 KIAA1210Q9ULL0 1709 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 SHTN1A0MZ66 631 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 CD1AP06126 327 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 ZNF37AP17032 561 aaPredicted RBP4.47□□□□□ -1.69
CBWD1-224ENST00000616803 LMO1P25800 156 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 RARRES1P49788 294 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 MPP3Q13368 585 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 PABPC1LQ4VXU2 614 aaKnown RBP4.47□□□□□ -1.69
CBWD1-224ENST00000616803 RSPH3Q86UC2 560 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 FAM43AQ8N2R8 423 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.47□□□□□ -1.69
CBWD1-224ENST00000616803 ZNF764Q96H86 408 aaPredicted RBP4.47□□□□□ -1.69
CBWD1-224ENST00000616803 PDLIM2Q96JY6 352 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 PNKPQ96T60 521 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 AIFM2Q9BRQ8 373 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 LRFN3Q9BTN0 628 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 C1orf43Q9BWL3 253 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 SMOC2Q9H3U7 446 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 PCDH12Q9NPG4 1184 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 CASS4Q9NQ75 786 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 CDYLQ9Y232 598 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 FANCAO15360 1455 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 CFAP74Q9C0B2 1584 aa4.47□□□□□ -1.69
CBWD1-224ENST00000616803 LMTK2Q8IWU2 1503 aa4.46□□□□□ -1.69
CBWD1-224ENST00000616803 CLTCL1P53675 1640 aa4.46□□□□□ -1.69
CBWD1-224ENST00000616803 ARHGEF17Q96PE2 2063 aaPredicted RBP4.46□□□□□ -1.7
CBWD1-224ENST00000616803 ADGRL1O94910 1474 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 PPFIA4O75335 1185 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 HAUS5O94927 633 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 MALP21145 153 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 TOB1P50616 345 aaPredicted RBP4.46□□□□□ -1.7
CBWD1-224ENST00000616803 HNRNPA0Q13151 305 aaKnown RBP4.46□□□□□ -1.7
CBWD1-224ENST00000616803 BOP1Q14137 746 aaKnown RBP4.46□□□□□ -1.7
CBWD1-224ENST00000616803 UAP1L1Q3KQV9 507 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 SPDYE7PQ495Y7 208 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 CCDC184Q52MB2 194 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 BRDTQ58F21 947 aaPredicted RBP4.46□□□□□ -1.7
CBWD1-224ENST00000616803 CFAP52Q8N1V2 620 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 LNX2Q8N448 690 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 PDPRQ8NCN5 879 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 SLC17A8Q8NDX2 589 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 HDAC10Q969S8 669 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 TMEM125Q96AQ2 219 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 IMPG2Q9BZV3 1241 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 KCTD5Q9NXV2 234 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.46□□□□□ -1.7
CBWD1-224ENST00000616803 EFCAB6Q5THR3 1501 aa4.46□□□□□ -1.7
CBWD1-224ENST00000616803 KTN1Q86UP2 1357 aaKnown RBP4.45□□□□□ -1.7
CBWD1-224ENST00000616803 MYADML2A6NDP7 307 aa4.45□□□□□ -1.7
CBWD1-224ENST00000616803 TEX33O43247 280 aa4.45□□□□□ -1.7
CBWD1-224ENST00000616803 ERN1O75460 977 aaKnown RBP4.45□□□□□ -1.7
CBWD1-224ENST00000616803 IGLV2-14P01704 120 aa4.45□□□□□ -1.7
CBWD1-224ENST00000616803 CREMQ03060 361 aa4.45□□□□□ -1.7
CBWD1-224ENST00000616803 RNF187Q5TA31 235 aaPredicted RBP4.45□□□□□ -1.7
CBWD1-224ENST00000616803 KIAA0895LQ68EN5 471 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms