RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SNX12Q9UMY4 172 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 TMEM150BA6NC51 233 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 C3orf70A6NLC5 250 aaPredicted RBP9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 CLGNO14967 610 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 FGFR4P22455 802 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 EPHB3P54753 998 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 NR1H3Q13133 447 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 PDK1Q15118 436 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 P3H1Q32P28 736 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 IL31Q6EBC2 164 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 CEP120Q8N960 986 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 KIAA0895Q8NCT3 520 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 IL17RAQ96F46 866 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 L3MBTL3Q96JM7 780 aaPredicted RBP9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 NMRK2Q9NPI5 230 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 PLAGL2Q9UPG8 496 aa9.92□□□□□ -0.82
CLTCL1-208ENST00000615606 PHRF1Q9P1Y6 1649 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 POMCP01189 267 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 ATP1A1P05023 1023 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 MRPS6P82932 125 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 LAMB3Q13751 1172 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 PSMD6Q15008 389 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 DUSP28Q4G0W2 176 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 IZUMO3Q5VZ72 239 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 C1orf186Q6ZWK4 172 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 CNPY4Q8N129 248 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 IL31RAQ8NI17 732 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 HAS1Q92839 578 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 TMEM176AQ96HP8 235 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 CISHQ9NSE2 258 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 KLHL11Q9NVR0 708 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 PLIN4Q96Q06 1357 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 UMODL1Q5DID0 1318 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 UNCXA6NJT0 531 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 GOLGA8MH3BSY2 632 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 KCNN4O15554 427 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 MTSS1O43312 755 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 MAFO75444 373 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 LSM8O95777 96 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 ARSEP51690 589 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 YWHAHQ04917 246 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 OVOS1Q6IE37 1185 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 TTC23LQ6PF05 361 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 POP1Q99575 1024 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 MMTAG2Q9BU76 263 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 PDGFDQ9GZP0 370 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 A0A0G2JLL6 359 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 CHEK2O96017 543 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 SETSIPP0DME0 302 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 ITGB5P18084 799 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 PTPN11Q06124 597 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 PRRT2Q7Z6L0 340 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 ITIH5Q86UX2 942 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 TMEM199Q8N511 208 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 DCLK2Q8N568 766 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 KRT35Q92764 455 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 PURBQ96QR8 312 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 DDIT4Q9NX09 232 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 HDAC6Q9UBN7 1215 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 CYP11B1P15538 503 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 EIF4BP23588 611 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 AKAP5P24588 427 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 IFNAR2P48551 515 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 CCT5P48643 541 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 FRA10AC1Q70Z53 315 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 ATP11CQ8NB49 1132 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 INPP4AQ96PE3 977 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 ADAM2Q99965 735 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 SYT15Q9BQS2 421 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 FAM8A1Q9UBU6 413 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 CDY2AQ9Y6F7 541 aa9.91□□□□□ -0.82
CLTCL1-208ENST00000615606 ASTN2O75129 1339 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 SEC31AO94979 1220 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 COMTP21964 271 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 SF3A3Q12874 501 aaKnown RBP eCLIP9.9□□□□□ -0.823e-8■■■■■ 54.4
CLTCL1-208ENST00000615606 OR6P1Q8NGX9 317 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 PPTC7Q8NI37 304 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 TTC8Q8TAM2 541 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 HASPINQ8TF76 798 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 PABPC5Q96DU9 382 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 C12orf42Q96LP6 360 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 FTHL17Q9BXU8 183 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 KRT82Q9NSB4 513 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 BARX2Q9UMQ3 279 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 SNCAIPQ9Y6H5 919 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 CICQ96RK0 1608 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 A0A087WUV0 522 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 SUN1O94901 812 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 SGPL1O95470 568 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 PRMT2P55345 433 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 ADCY1Q08828 1119 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 BST2Q10589 180 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 PDIA2Q13087 525 aaKnown RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 PLD1Q13393 1074 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 SDE2Q6IQ49 451 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 MTHFD1LQ6UB35 978 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 OSBPL8Q9BZF1 889 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 PCDHB5Q9Y5E4 795 aa9.9□□□□□ -0.82
CLTCL1-208ENST00000615606 E5RI56 91 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms