RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 SMYD1Q8NB12 490 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 ZNF564Q8TBZ8 553 aaPredicted RBP10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 TCP10LQ8TDR4 215 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 GIPC3Q8TF64 312 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 PTCD3Q96EY7 689 aaKnown RBP10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 MAML3Q96JK9 1138 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 AGPAT1Q99943 283 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 STK32BQ9NY57 414 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 FOXN3O00409 490 aaPredicted RBP10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 ATP2A1O14983 1001 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 PMLP29590 882 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 CAV1Q03135 178 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 KRT81Q14533 505 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 CYTH1Q15438 398 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 ZYXQ15942 572 aaKnown RBP10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 SLC35C1Q96A29 364 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 NSUN4Q96CB9 384 aaKnown RBP10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 BRIP1Q9BX63 1249 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 KCTD10Q9H3F6 313 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 UBE2TQ9NPD8 197 aaPredicted RBP10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 SLC7A8Q9UHI5 535 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 IKBKGQ9Y6K9 419 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 LAMB4A4D0S4 1761 aa10.91□□□□□ -0.66
TNFAIP3-208ENST00000615468 SHANK3Q9BYB0 1731 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 MYOCOSA0A1B0GUC4 107 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 TMEM247A6NEH6 219 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 ATP9BO43861 1147 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 TRMUO75648 421 aaKnown RBP10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 SLURP2P0DP57 97 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 FGFR1P11362 822 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 MUTP22033 750 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 ZNF200P98182 395 aaPredicted RBP10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 FOLH1Q04609 750 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 MAP3K21Q5TCX8 1036 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 NET1Q7Z628 596 aaPredicted RBP10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 TRIML2Q8N7C3 387 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 POU5F2Q8N7G0 328 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 CCDC89Q8N998 374 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 ATP11CQ8NB49 1132 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 USP6NLQ92738 828 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 OXCT2Q9BYC2 517 aaPredicted RBP10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 BRD8Q9H0E9 1235 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 SELENONQ9NZV5 590 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 SENP1Q9P0U3 644 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 DDX25Q9UHL0 483 aaKnown RBP10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 I3L4J1 428 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 M0R2N6 131 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 XPOTO43592 962 aaKnown RBP10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 VARSP26640 1264 aaKnown RBP10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 PDIA2Q13087 525 aaKnown RBP10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 LPIN1Q14693 890 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 CNGA3Q16281 694 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 GAB3Q8WWW8 586 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 MAK16Q9BXY0 300 aaKnown RBP10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 ZC3H12CQ9C0D7 883 aaKnown RBP10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 Q9H521 79 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 DBNDD1Q9H9R9 158 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 LIN28AQ9H9Z2 209 aaKnown RBP10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 USP29Q9HBJ7 922 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 ACP6Q9NPH0 428 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 TIMMDC1Q9NPL8 285 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 MAD2L2Q9UI95 211 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 NEU2Q9Y3R4 380 aa10.9□□□□□ -0.66
TNFAIP3-208ENST00000615468 F8W8V4 182 aa10.9□□□□□ -0.67
TNFAIP3-208ENST00000615468 PCP11498 1178 aaKnown RBP10.9□□□□□ -0.67
TNFAIP3-208ENST00000615468 ALAS1P13196 640 aa10.9□□□□□ -0.67
TNFAIP3-208ENST00000615468 BGNP21810 368 aa10.9□□□□□ -0.67
TNFAIP3-208ENST00000615468 NFKBIAP25963 317 aa10.9□□□□□ -0.67
TNFAIP3-208ENST00000615468 SULT2A1Q06520 285 aa10.9□□□□□ -0.67
TNFAIP3-208ENST00000615468 DAGLBQ8NCG7 672 aa10.9□□□□□ -0.67
TNFAIP3-208ENST00000615468 ANLNQ9NQW6 1124 aa10.9□□□□□ -0.67
TNFAIP3-208ENST00000615468 THEGQ9P2T0 379 aa10.9□□□□□ -0.67
TNFAIP3-208ENST00000615468 CAPN8A6NHC0 703 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 CACNB3P54284 484 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 MARSP56192 900 aaKnown RBP10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 ACTR3P61158 418 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 GRM4Q14833 912 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 UBE2SQ16763 222 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 ANKRD20A4Q4UJ75 823 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 KAZNQ674X7 775 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 POTEGQ6S5H5 508 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 ANO5Q75V66 913 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 EFCAB3Q8N7B9 438 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 ZFP28Q8NHY6 868 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 DENND1AQ8TEH3 1009 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 ZNF384Q8TF68 577 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 GFM2Q969S9 779 aaKnown RBP10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 RIOK1Q9BRS2 568 aaKnown RBP10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 SIX2Q9NPC8 291 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 DCP1AQ9NPI6 582 aaPredicted RBP10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 SLC17A7Q9P2U7 560 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 HEMK1Q9Y5R4 338 aaPredicted RBP10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 CCDC195A0A1B0GUA6 201 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 FKBP6O75344 327 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 TFPTP0C1Z6 253 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.673e-6■□□□□ 10.5
TNFAIP3-208ENST00000615468 TCP10Q12799 353 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 PAOXQ6QHF9 649 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 FBXO33Q7Z6M2 555 aa10.89□□□□□ -0.67
TNFAIP3-208ENST00000615468 PDSS2Q86YH6 399 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms