RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 HYAL1Q12794 435 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 CUL2Q13617 745 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 MEA1Q16626 185 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 UPP1Q16831 310 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 CTC1Q2NKJ3 1217 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 SGSM1Q2NKQ1 1148 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 ZNF667Q5HYK9 610 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 HGSNATQ68CP4 663 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 CACNA2D4Q7Z3S7 1137 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 LIMS2Q7Z4I7 341 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 LRRC8AQ8IWT6 810 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 LRRC52Q8N7C0 313 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 CCDC150Q8NCX0 1101 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-205ENST00000614931 URGCPQ8TCY9 931 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 HASPINQ8TF76 798 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 BCL7CQ8WUZ0 217 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-205ENST00000614931 STK33Q9BYT3 514 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 BCO2Q9BYV7 579 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 CWH43Q9H720 699 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 ACP6Q9NPH0 428 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 AAASQ9NRG9 546 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 SLC38A7Q9NVC3 462 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 NXF1Q9UBU9 619 aaKnown RBP8.61□□□□□ -1.03
PCDH9-205ENST00000614931 HMGXB4Q9UGU5 601 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 L1RE1Q9UN81 338 aa8.61□□□□□ -1.03
PCDH9-205ENST00000614931 XIRP2A4UGR9 3374 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 PATJQ8NI35 1801 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 I3L4J1 428 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 HCRTO43612 131 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 GFPT2O94808 682 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 KIF4AO95239 1232 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 WEE2P0C1S8 567 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 SKILP12757 684 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 LAG3P18627 525 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 RFX1P22670 979 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 HNRNPH3P31942 346 aaKnown RBP8.6□□□□□ -1.03
PCDH9-205ENST00000614931 CLCN1P35523 988 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 SOX5P35711 763 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 LTBRP36941 435 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 PBX3P40426 434 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 BRCC3P46736 316 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 SLC11A1P49279 550 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 AARSP49588 968 aaKnown RBP eCLIP8.6□□□□□ -1.033e-6■■■■■ 61.8
PCDH9-205ENST00000614931 TAF6P49848 677 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 GSDMDP57764 484 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 LILRA4P59901 499 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 UBE3AQ05086 875 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 MTF1Q14872 753 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 PUS10Q3MIT2 529 aaKnown RBP8.6□□□□□ -1.03
PCDH9-205ENST00000614931 WDR72Q3MJ13 1102 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 WDR44Q5JSH3 913 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 IRF2BP2Q7Z5L9 587 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 OSTM1Q86WC4 334 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 TMEM173Q86WV6 379 aaPredicted RBP8.6□□□□□ -1.03
PCDH9-205ENST00000614931 CNGA4Q8IV77 575 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 FAM71AQ8IYT1 594 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 COLGALT1Q8NBJ5 622 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 OR8K1Q8NGG5 319 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 WHAMMQ8TF30 809 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 POF1BQ8WVV4 589 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 KBTBD7Q8WVZ9 684 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 TAF4BQ92750 862 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 IQCDQ96DY2 449 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 ZNF560Q96MR9 790 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 SPAG5Q96R06 1193 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 PANX2Q96RD6 677 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 TWNKQ96RR1 684 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 CHP1Q99653 195 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 MRPL45Q9BRJ2 306 aaKnown RBP8.6□□□□□ -1.03
PCDH9-205ENST00000614931 IMPG2Q9BZV3 1241 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 ELOVL4Q9GZR5 314 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 MARCH5Q9NX47 278 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 ARHGAP20Q9P2F6 1191 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 DAAM1Q9Y4D1 1078 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 PCDHB12Q9Y5F1 795 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 SNX9Q9Y5X1 595 aa8.6□□□□□ -1.03
PCDH9-205ENST00000614931 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.6□□□□□ -1.03
PCDH9-205ENST00000614931 VCANP13611 3396 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 GRXCR2A6NFK2 248 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 SOWAHDA6NJG2 315 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 GOLGA6L6A8MZA4 724 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 KPNA7A9QM74 516 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 H3BQ06 376 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-205ENST00000614931 CYP26A1O43174 497 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 FGF18O76093 207 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 CLSTN1O94985 981 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 CD58P19256 250 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 TBXAS1P24557 533 aaPredicted RBP8.59□□□□□ -1.03
PCDH9-205ENST00000614931 RPL9P32969 192 aaKnown RBP8.59□□□□□ -1.03
PCDH9-205ENST00000614931 GTF2F1P35269 517 aaKnown RBP eCLIP8.59□□□□□ -1.03
PCDH9-205ENST00000614931 IRS1P35568 1242 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 STAT1P42224 750 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 ZNF132P52740 706 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 MFAP3P55082 362 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 PLCB3Q01970 1234 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 ARID5AQ03989 594 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 ORC1Q13415 861 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 ADAM15Q13444 863 aa8.59□□□□□ -1.03
PCDH9-205ENST00000614931 ASIC2Q16515 512 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms