RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 PPP1R3GB7ZBB8 358 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 H0YCG3 227 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 TMEM191BP0C7N4 346 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 ATF2P15336 505 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 GBP2P32456 591 aaPredicted RBP6.14□□□□□ -1.43
CPNE3-208ENST00000614678 VIPR2P41587 438 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 AAK1Q2M2I8 961 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 TTC8Q8TAM2 541 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 PPP2R3CQ969Q6 453 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 HPDLQ96IR7 371 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 MMS19Q96T76 1030 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 SEPT5Q99719 369 aaPredicted RBP6.14□□□□□ -1.43
CPNE3-208ENST00000614678 DUSP9Q99956 384 aaKnown RBP6.14□□□□□ -1.43
CPNE3-208ENST00000614678 KXD1Q9BQD3 176 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 CRTAC1Q9NQ79 661 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 FNIP2Q9P278 1114 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 PCDHB8Q9UN66 801 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 EXOC7Q9UPT5 735 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 C2CD2Q9Y426 696 aa6.14□□□□□ -1.43
CPNE3-208ENST00000614678 PRRG1O14668 218 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 BEST1O76090 585 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 OAZ2O95190 189 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 C4BPAP04003 597 aaKnown RBP6.13□□□□□ -1.43
CPNE3-208ENST00000614678 RPL9P32969 192 aaKnown RBP6.13□□□□□ -1.43
CPNE3-208ENST00000614678 TAF6P49848 677 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 PDE12Q6L8Q7 609 aaKnown RBP6.13□□□□□ -1.43
CPNE3-208ENST00000614678 GAREM2Q75VX8 874 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 SV2AQ7L0J3 742 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 FGF13Q92913 245 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 MFSD14AQ96MC6 490 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 CDCA3Q99618 268 aaPredicted RBP6.13□□□□□ -1.43
CPNE3-208ENST00000614678 PRKD2Q9BZL6 878 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 SFXN1Q9H9B4 322 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 KCNK12Q9HB15 430 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 PIDD1Q9HB75 910 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 DDX43Q9NXZ2 648 aaKnown RBP6.13□□□□□ -1.43
CPNE3-208ENST00000614678 INSL5Q9Y5Q6 135 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 RIF1Q5UIP0 2472 aaKnown RBP6.13□□□□□ -1.43
CPNE3-208ENST00000614678 A0A1W2PRU2 124 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 PI15O43692 258 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 CLSTN1O94985 981 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 RHOP08100 348 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 USP46P62068 366 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 CYP4F8P98187 520 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 LRMPQ12912 555 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 ADAM9Q13443 819 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 ZNF394Q53GI3 561 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 PPM1LQ5SGD2 360 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 ATAT1Q5SQI0 421 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 NAIF1Q69YI7 327 aaPredicted RBP6.13□□□□□ -1.43
CPNE3-208ENST00000614678 CES5AQ6NT32 575 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 ANKS3Q6ZW76 656 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 KAT5Q92993 513 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 ZFYVE19Q96K21 471 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 WDR6Q9NNW5 1121 aaKnown RBP6.13□□□□□ -1.43
CPNE3-208ENST00000614678 CTNND2Q9UQB3 1225 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 MYOFQ9NZM1 2061 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 MYH10P35580 1976 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 EP300Q09472 2414 aaPredicted RBP6.13□□□□□ -1.43
CPNE3-208ENST00000614678 CFHP08603 1231 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 PSMD6Q15008 389 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 CENPPQ6IPU0 288 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 TMEM150AQ86TG1 271 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 PIAS4Q8N2W9 510 aaPredicted RBP6.13□□□□□ -1.43
CPNE3-208ENST00000614678 TATDN2Q93075 761 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 HVCN1Q96D96 273 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 UROC1Q96N76 676 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 IPO9Q96P70 1041 aaKnown RBP6.13□□□□□ -1.43
CPNE3-208ENST00000614678 SLC22A12Q96S37 553 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 CYP2S1Q96SQ9 504 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 KCNK16Q96T55 309 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 LRFN3Q9BTN0 628 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 ACP6Q9NPH0 428 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 YIPF1Q9Y548 306 aa6.13□□□□□ -1.43
CPNE3-208ENST00000614678 CYP3A5P20815 502 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 VCPP55072 806 aaKnown RBP6.12□□□□□ -1.43
CPNE3-208ENST00000614678 ZXDBP98169 803 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 BIRC3Q13489 604 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 GRM2Q14416 872 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 DPCR1Q3MIW9 517 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 NPAS3Q8IXF0 933 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 ADSSL1Q8N142 457 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 PHOX2BQ99453 314 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 PKMYT1Q99640 499 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 LRRC3Q9BY71 257 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 MAGED2Q9UNF1 606 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-208ENST00000614678 CCL26Q9Y258 94 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 NUMBLQ9Y6R0 609 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 CLUHO75153 1309 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 MYL4P12829 197 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 IFRD2Q12894 506 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-208ENST00000614678 TEAD2Q15562 447 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 MGAT5BQ3V5L5 792 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 TANGO2Q6ICL3 276 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 ZNF280DQ6N043 979 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 CCDC149Q6ZUS6 474 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 DPH6Q7L8W6 267 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 CREBRFQ8IUR6 639 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 SMARCE1Q969G3 411 aa6.12□□□□□ -1.43
CPNE3-208ENST00000614678 CGRRF1Q99675 332 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms