RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 GBA2Q9HCG7 927 aaPredicted RBP11.86□□□□□ -0.51
ATF3-211ENST00000613954 EURLQ9NYK6 297 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 CHORDC1Q9UHD1 332 aaPredicted RBP11.86□□□□□ -0.51
ATF3-211ENST00000613954 ANAPC7Q9UJX3 599 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 SMG5Q9UPR3 1016 aaKnown RBP11.86□□□□□ -0.51
ATF3-211ENST00000613954 SLC45A1Q9Y2W3 748 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 GSTTP1A0A1W2PQM5 241 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 NDC80O14777 642 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 PRPF4O43172 522 aaKnown RBP eCLIP11.86□□□□□ -0.51
ATF3-211ENST00000613954 LMNAP02545 664 aaKnown RBP11.86□□□□□ -0.51
ATF3-211ENST00000613954 Q3C1V9 767 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 ENOSF1Q7L5Y1 443 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 USP37Q86T82 979 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 TDRPQ86YL5 185 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 CYP4X1Q8N118 509 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 DAW1Q8N136 415 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 C2orf69Q8N8R5 385 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 SHCBP1Q8NEM2 672 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 ATP6V0A1Q93050 837 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 NT5C1BQ96P26 610 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 MPHOSPH6Q99547 160 aaKnown RBP11.86□□□□□ -0.51
ATF3-211ENST00000613954 MYLK2Q9H1R3 596 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 SPATS2LQ9NUQ6 558 aaKnown RBP11.86□□□□□ -0.51
ATF3-211ENST00000613954 TBK1Q9UHD2 729 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 LRRC42Q9Y546 428 aa11.86□□□□□ -0.51
ATF3-211ENST00000613954 KIAA1217Q5T5P2 1943 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 ASMTLO95671 621 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 PLS3P13797 630 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 GNAZP19086 355 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 GPC3P51654 580 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 GTF2BQ00403 316 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 FSTL1Q12841 308 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 CLEC16AQ2KHT3 1053 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 WASHC2DQ5SRD0 308 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 LMNTD2Q8IXW0 634 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 STK32AQ8WU08 396 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 KAT5Q92993 513 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 ERP27Q96DN0 273 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 MS4A4AQ96JQ5 239 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 MMP19Q99542 508 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 CBWD1Q9BRT8 395 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 PHTF1Q9UMS5 762 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 TRIM33Q9UPN9 1127 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 COQ4Q9Y3A0 265 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 NEU2Q9Y3R4 380 aa11.85□□□□□ -0.51
ATF3-211ENST00000613954 PSTPIP1O43586 416 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 CELF2O95319 508 aaKnown RBP11.84□□□□□ -0.51
ATF3-211ENST00000613954 FOXN2P32314 431 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 ACTR2P61160 394 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 KCTD2Q14681 263 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 IZUMO3Q5VZ72 239 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 ABHD15Q6UXT9 468 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 SEPT14Q6ZU15 432 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 ZNF677Q86XU0 584 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 CPNE8Q86YQ8 564 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 ZCCHC9Q8N567 271 aaKnown RBP11.84□□□□□ -0.51
ATF3-211ENST00000613954 ENDOVQ8N8Q3 282 aaKnown RBP11.84□□□□□ -0.51
ATF3-211ENST00000613954 ANKLE1Q8NAG6 615 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 MAML1Q92585 1016 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 SLC24A3Q9HC58 644 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 TMEM8AQ9HCN3 771 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 GABBR1Q9UBS5 961 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 EXOC7Q9UPT5 735 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 DNAJC25-GNG10A0A024R161 153 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 CCL15-CCL14A0A0B4J2E2 113 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 EXOC1LA0A1B0GW35 172 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 A6NHS1 94 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 PDHXO00330 501 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 TRAFD1O14545 582 aaPredicted RBP11.84□□□□□ -0.51
ATF3-211ENST00000613954 GTF2H1P32780 548 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 CETN2P41208 172 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 MAGEA4P43358 317 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 WDR4P57081 412 aaKnown RBP11.84□□□□□ -0.51
ATF3-211ENST00000613954 MRPS35P82673 323 aaKnown RBP11.84□□□□□ -0.51
ATF3-211ENST00000613954 SP2Q02086 613 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 KLF1Q13351 362 aaPredicted RBP11.84□□□□□ -0.51
ATF3-211ENST00000613954 TMED2Q15363 201 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 TRIP13Q15645 432 aaPredicted RBP11.84□□□□□ -0.51
ATF3-211ENST00000613954 PDK4Q16654 411 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 CCL15Q16663 113 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 NBPF20Q3BBV1 942 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 XKR9Q5GH70 373 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 FAM47EQ6ZV65 393 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 ANKRD23Q86SG2 305 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 TRABD2AQ86V40 505 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 HELQQ8TDG4 1101 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 LRRC8CQ8TDW0 803 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 ATG4AQ8WYN0 398 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 DDX1Q92499 740 aaKnown RBP11.84□□□□□ -0.51
ATF3-211ENST00000613954 UTP4Q969X6 686 aaKnown RBP11.84□□□□□ -0.51
ATF3-211ENST00000613954 SMC6Q96SB8 1091 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 RBM15Q96T37 977 aaKnown RBP eCLIP11.84□□□□□ -0.512e-6■■■■□ 23.8
ATF3-211ENST00000613954 PAIP2Q9BPZ3 127 aaKnown RBP11.84□□□□□ -0.51
ATF3-211ENST00000613954 R3HDMLQ9H3Y0 253 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 ZFATQ9P243 1243 aa11.84□□□□□ -0.51
ATF3-211ENST00000613954 ZNFX1Q9P2E3 1918 aaKnown RBP11.83□□□□□ -0.52
ATF3-211ENST00000613954 BTBD19C9JJ37 291 aa11.83□□□□□ -0.52
ATF3-211ENST00000613954 MYCNP04198 464 aaPredicted RBP11.83□□□□□ -0.52
ATF3-211ENST00000613954 SUPT20HL2P0C7V6 817 aa11.83□□□□□ -0.52
ATF3-211ENST00000613954 CYP2C8P10632 490 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms