RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 WEE2P0C1S8 567 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 PRLRP16471 622 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 ABCB4P21439 1286 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 AKAP5P24588 427 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 GNA15P30679 374 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 POLR2BP30876 1174 aaKnown RBP9.51□□□□□ -0.89
CCDC47-207ENST00000612558 ZNF132P52740 706 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 GPC5P78333 572 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 MYO1EQ12965 1108 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 TCEAL1Q15170 157 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 CLEC16AQ2KHT3 1053 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 XKR4Q5GH76 650 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 ACAD10Q6JQN1 1059 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 TRIM72Q6ZMU5 477 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 RHOT2Q8IXI1 618 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 SMG8Q8ND04 991 aaKnown RBP9.51□□□□□ -0.89
CCDC47-207ENST00000612558 MNS1Q8NEH6 495 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 BEST2Q8NFU1 509 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 SLC35G2Q8TBE7 412 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 HPDLQ96IR7 371 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 MRGPRX2Q96LB1 330 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 ZMAT2Q96NC0 199 aaKnown RBP9.51□□□□□ -0.89
CCDC47-207ENST00000612558 USB1Q9BQ65 265 aaKnown RBP9.51□□□□□ -0.89
CCDC47-207ENST00000612558 APOL6Q9BWW8 343 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 CARD6Q9BX69 1037 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 BCO2Q9BYV7 579 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 THAP2Q9H0W7 228 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 PDCL3Q9H2J4 239 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 CYP3A43Q9HB55 503 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 PARP2Q9UGN5 583 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 UBQLN1Q9UMX0 589 aaKnown RBP9.51□□□□□ -0.89
CCDC47-207ENST00000612558 IPPQ9Y573 584 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 NCANO14594 1321 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 RALGAPA2Q2PPJ7 1873 aa9.51□□□□□ -0.89
CCDC47-207ENST00000612558 SMIM28A0A1B0GU29 152 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 A0A1W2PQ45 241 aaPredicted RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 A0A1W2PQY0 241 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 GRID2IPA4D2P6 1211 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 DYNC1I1O14576 645 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 TERTO14746 1132 aaKnown RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 THAP12O43422 761 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 CD4P01730 458 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 CYP1A1P04798 512 aaPredicted RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 UNGP13051 313 aaPredicted RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 KCNE1P15382 129 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 ZSCAN20P17040 1043 aaPredicted RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 CD58P19256 250 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 HADHBP55084 474 aaKnown RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 WHAMMP3Q1A5X7 153 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 TRIM71Q2Q1W2 868 aaKnown RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 FAM26DQ5JW98 314 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 FBXO47Q5MNV8 452 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 PPP1R2P3Q6NXS1 205 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 SCARA5Q6ZMJ2 495 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 HACE1Q8IYU2 909 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 SYCE1Q8N0S2 351 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 TTC39CQ8N584 583 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 CEP112Q8N8E3 955 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 USP38Q8NB14 1042 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 SLC43A3Q8NBI5 491 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 TPCN2Q8NHX9 752 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 SEZ6LQ9BYH1 1024 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 CXCL16Q9H2A7 254 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 STARD7Q9NQZ5 370 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 TRMT13Q9NUP7 481 aaKnown RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 SNX12Q9UMY4 172 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 POLIQ9UNA4 740 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 SQORQ9Y6N5 450 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 HTTP42858 3142 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 A0A0U1RQG5 324 aaPredicted RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 KBTBD13C9JR72 458 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 TLR3O15455 904 aaKnown RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 CALCAP01258 141 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 PAEPP09466 180 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 ATF7P17544 494 aaPredicted RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 TCP1P17987 556 aaKnown RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 CYP3A5P20815 502 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 GUCY2FP51841 1108 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 TNNC1P63316 161 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 MEI1Q5TIA1 1274 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 SLFN11Q7Z7L1 901 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 LRRC52Q8N7C0 313 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 LRRC57Q8N9N7 239 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 SH3TC2Q8TF17 1288 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 ZNF606Q8WXB4 792 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 ARHGEF26Q96DR7 871 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 TRAIPQ9BWF2 469 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 TLR10Q9BXR5 811 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 AGO3Q9H9G7 860 aaKnown RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 ERVK-5Q9HDB9 667 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 FAM105AQ9NUU6 356 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 KLK14Q9P0G3 267 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 PUF60Q9UHX1 559 aaKnown RBP9.5□□□□□ -0.89
CCDC47-207ENST00000612558 GTF3C4Q9UKN8 822 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 PHF24Q9UPV7 400 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 PTPN22Q9Y2R2 807 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 HYOU1Q9Y4L1 999 aa9.5□□□□□ -0.89
CCDC47-207ENST00000612558 SCN1AP35498 2009 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 FAM181BA6NEQ2 426 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms