RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 C6orf203Q9P0P8 240 aaPredicted RBP9.25□□□□□ -0.93
LINC00547-201ENST00000612438 APEX2Q9UBZ4 518 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 SATB2Q9UPW6 733 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 ZMYM2Q9UBW7 1377 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 COL16A1Q07092 1604 aaPredicted RBP9.25□□□□□ -0.93
LINC00547-201ENST00000612438 STRNO43815 780 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 ENTPD5O75356 428 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 GGPS1O95749 300 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 COL6A2P12110 1019 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 FGFR4P22455 802 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 SHMT1P34896 483 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 CCR3P51677 355 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 AP1B1Q10567 949 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 CTTNQ14247 550 aaKnown RBP9.25□□□□□ -0.93
LINC00547-201ENST00000612438 KAZNQ674X7 775 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 RINT1Q6NUQ1 792 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 CCDC137Q6PK04 289 aaKnown RBP9.25□□□□□ -0.93
LINC00547-201ENST00000612438 FAM47EQ6ZV65 393 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 NLRP9Q7RTR0 991 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 STARD8Q92502 1023 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 INPP5DQ92835 1189 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 ANKRD36BP1Q96IX9 119 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 AGPAT1Q99943 283 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 HGH1Q9BTY7 390 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 AASDHPPTQ9NRN7 309 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 SEPT11Q9NVA2 429 aaKnown RBP9.25□□□□□ -0.93
LINC00547-201ENST00000612438 SERPINB13Q9UIV8 391 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 FAF1Q9UNN5 650 aaPredicted RBP9.25□□□□□ -0.93
LINC00547-201ENST00000612438 NOX1Q9Y5S8 564 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 C10orf71Q711Q0 1435 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 FAM170AA1A519 330 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 OPHN1O60890 802 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 ZBED4O75132 1171 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 FBXO21O94952 628 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 POLR2EP19388 210 aaKnown RBP9.25□□□□□ -0.93
LINC00547-201ENST00000612438 BDNFP23560 247 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 ATP2B4P23634 1241 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 NMT1P30419 496 aaKnown RBP9.25□□□□□ -0.93
LINC00547-201ENST00000612438 MARCKSL1P49006 195 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 SLC34A1Q06495 639 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 SLC15A2Q16348 729 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 ARL13BQ3SXY8 428 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 ZNF568Q3ZCX4 644 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 GJD4Q96KN9 370 aaPredicted RBP9.25□□□□□ -0.93
LINC00547-201ENST00000612438 ZSWIM1Q9BR11 485 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 EPB41L1Q9H4G0 881 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 DDX4Q9NQI0 724 aaKnown RBP9.25□□□□□ -0.93
LINC00547-201ENST00000612438 DMAC2Q9NW81 257 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 STK32BQ9NY57 414 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 KLHL14Q9P2G3 628 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 RABGAP1Q9Y3P9 1069 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 PCDHB2Q9Y5E7 798 aa9.25□□□□□ -0.93
LINC00547-201ENST00000612438 RASA4BC9J798 803 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 FAM86B1E9PN63 330 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 TNFRSF10AO00220 468 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 FOXN3O00409 490 aaPredicted RBP9.24□□□□□ -0.93
LINC00547-201ENST00000612438 RASA4O43374 803 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 FAM86B2P0C5J1 330 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 COG7P83436 770 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 SEPT6Q14141 434 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 E2F2Q14209 437 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 SUZ12Q15022 739 aaKnown RBP9.24□□□□□ -0.93
LINC00547-201ENST00000612438 VPS72Q15906 364 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 CYP1B1Q16678 543 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 NDUFA5Q16718 116 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 ARHGAP44Q17R89 818 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 SYCP2LQ5T4T6 812 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 METTL21CQ5VZV1 264 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 ESX1Q8N693 406 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 CCDC127Q96BQ5 260 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 RUNDC3BQ96NL0 473 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 EIF2AK1Q9BQI3 630 aaKnown RBP9.24□□□□□ -0.93
LINC00547-201ENST00000612438 CCDC113Q9H0I3 377 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 TUT1Q9H6E5 874 aaKnown RBP9.24□□□□□ -0.93
LINC00547-201ENST00000612438 VAV3Q9UKW4 847 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 PFASO15067 1338 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 ZNF831Q5JPB2 1677 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 ANKRD63C9JTQ0 380 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 MSH4O15457 936 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 ZBED1O96006 694 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 FTLP02792 175 aaPredicted RBP9.24□□□□□ -0.93
LINC00547-201ENST00000612438 COILP38432 576 aaPredicted RBP9.24□□□□□ -0.93
LINC00547-201ENST00000612438 COG2Q14746 738 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 HSP90AA5PQ58FG0 334 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 CYFIP1Q7L576 1253 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 VSIG1Q86XK7 387 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 GRAMD2AQ8IUY3 354 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 MYCT1Q8N699 235 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 DDHD1Q8NEL9 900 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 TBC1D16Q8TBP0 767 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 CEP44Q9C0F1 390 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 DDX18Q9NVP1 670 aaKnown RBP9.24□□□□□ -0.93
LINC00547-201ENST00000612438 SELENONQ9NZV5 590 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 GGA1Q9UJY5 639 aa9.24□□□□□ -0.93
LINC00547-201ENST00000612438 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.24□□□□□ -0.93
LINC00547-201ENST00000612438 TCP11X1B4DZS4 312 aa9.23□□□□□ -0.93
LINC00547-201ENST00000612438 EML1O00423 815 aa9.23□□□□□ -0.93
LINC00547-201ENST00000612438 BBOX1O75936 387 aa9.23□□□□□ -0.93
LINC00547-201ENST00000612438 FAM13AO94988 1023 aa9.23□□□□□ -0.93
LINC00547-201ENST00000612438 TRIM49P0CI25 452 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms