RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 A0A1B0GUA9 196 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 KRT38O76015 456 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 CCNE2O96020 404 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 CYP2C8P10632 490 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 LRRC31Q6UY01 552 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 SLC9A9Q8IVB4 645 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 APPL2Q8NEU8 664 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 LRRC15Q8TF66 581 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 SALL4Q9UJQ4 1053 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 NUP188Q5SRE5 1749 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 TMEM120BA0PK00 339 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 SLC4A1P02730 911 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 TSNAXIP1Q2TAA8 658 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 GOLGA7BQ2TAP0 167 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 TRIM42Q8IWZ5 723 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 AFAP1L2Q8N4X5 818 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 KLF6Q99612 283 aaPredicted RBP13.83□□□□□ -0.2
TCF3-220ENST00000611869 SEMA4AQ9H3S1 761 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 CHMP2BQ9UQN3 213 aa13.83□□□□□ -0.2
TCF3-220ENST00000611869 FNDC3AQ9Y2H6 1198 aaKnown RBP13.83□□□□□ -0.2
TCF3-220ENST00000611869 KLRG2A4D1S0 409 aaPredicted RBP13.82□□□□□ -0.2
TCF3-220ENST00000611869 PEX10O60683 326 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 CAND2O75155 1236 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 SRGAP2BP0DMP2 458 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 CENPCQ03188 943 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 PSMD6Q15008 389 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 EFHC2Q5JST6 749 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 MOB2Q70IA6 237 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 WDR49Q8IV35 697 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 DPP3Q9NY33 737 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 TLK1Q9UKI8 766 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
TCF3-220ENST00000611869 MAPK13O15264 365 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 MEFVO15553 781 aaPredicted RBP13.82□□□□□ -0.2
TCF3-220ENST00000611869 GLRA2P23416 452 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 HUNKP57058 714 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 ACOT1Q86TX2 421 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 FAM71DQ8N9W8 422 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 COPS5Q92905 334 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.82□□□□□ -0.2
TCF3-220ENST00000611869 LAMB4A4D0S4 1761 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 H3BRB1 525 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 BAG2O95816 211 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 CDH8P55286 799 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 SESN2P58004 480 aaPredicted RBP13.82□□□□□ -0.2
TCF3-220ENST00000611869 PTGISQ16647 500 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 TRIM68Q6AZZ1 485 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 CDKL3Q8IVW4 592 aaPredicted RBP13.82□□□□□ -0.2
TCF3-220ENST00000611869 TUT1Q9H6E5 874 aaKnown RBP13.82□□□□□ -0.2
TCF3-220ENST00000611869 LRFN2Q9ULH4 789 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 G3BP2Q9UN86 482 aaKnown RBP13.82□□□□□ -0.2
TCF3-220ENST00000611869 PSTPIP1O43586 416 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 PLA2G6O60733 806 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 CELF2O95319 508 aaKnown RBP13.82□□□□□ -0.2
TCF3-220ENST00000611869 MOCS2O96007 188 aaPredicted RBP13.82□□□□□ -0.2
TCF3-220ENST00000611869 RARAP10276 462 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 GPD1P21695 349 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 MARCKSL1P49006 195 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 STILQ15468 1287 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 MAP1SQ66K74 1059 aaPredicted RBP13.82□□□□□ -0.2
TCF3-220ENST00000611869 PID1Q7Z2X4 250 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 DCLK2Q8N568 766 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 PORCNQ9H237 461 aa13.82□□□□□ -0.2
TCF3-220ENST00000611869 XPO7Q9UIA9 1087 aaKnown RBP13.82□□□□□ -0.2
TCF3-220ENST00000611869 RPSAP08865 295 aaKnown RBP13.81□□□□□ -0.2
TCF3-220ENST00000611869 SLC8A1P32418 973 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 ZNF157P51786 506 aaPredicted RBP13.81□□□□□ -0.2
TCF3-220ENST00000611869 TRIM55Q9BYV6 548 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 TXLNGQ9NUQ3 528 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 DOT1LQ8TEK3 1739 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 CSPG5O95196 566 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 ZNF484Q5JVG2 852 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 LMNTD2Q8IXW0 634 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 LENG9Q96B70 501 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 AGAP3Q96P47 875 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 TMBIM4Q9HC24 238 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 NUP98P52948 1817 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 CCDC195A0A1B0GUA6 201 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 CCDC160A6NGH7 325 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 LPXNO60711 386 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 FAXCQ5TGI0 409 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 KDM7AQ6ZMT4 941 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 MCUQ8NE86 351 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 VPS11Q9H270 941 aa13.81□□□□□ -0.2
TCF3-220ENST00000611869 CDC42EP4Q9H3Q1 356 aaKnown RBP13.81□□□□□ -0.2
TCF3-220ENST00000611869 ARHGEF37A1IGU5 675 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 CXCL11O14625 94 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 KIAA1841Q6NSI8 718 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 NOTUMQ6P988 496 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 C3orf62Q6ZUJ4 267 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 SIAH1Q8IUQ4 282 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 BRSK2Q8IWQ3 736 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 GBP7Q8N8V2 638 aaPredicted RBP13.8□□□□□ -0.2
TCF3-220ENST00000611869 INPP4AQ96PE3 977 aaPredicted RBP13.8□□□□□ -0.2
TCF3-220ENST00000611869 CYTH2Q99418 400 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 RSAD1Q9HA92 442 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 ATP8B3O60423 1300 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 ONECUT3O60422 494 aaPredicted RBP13.8□□□□□ -0.2
TCF3-220ENST00000611869 KITP10721 976 aa13.8□□□□□ -0.2
TCF3-220ENST00000611869 RARGP13631 454 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms