RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NINJ2Q9NZG7 142 aa9.15□□□□□ -0.95
LIG4-204ENST00000611712 USH1CQ9Y6N9 552 aa9.15□□□□□ -0.95
LIG4-204ENST00000611712 DRD4P21917 467 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 SDC4P31431 198 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 COPS2P61201 443 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 PSMD6Q15008 389 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 TTC27Q6P3X3 843 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 CNPY4Q8N129 248 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 OTUD5Q96G74 571 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 PWWP2AQ96N64 755 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 CYTH2Q99418 400 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 LRRC19Q9H756 370 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 IFT122Q9HBG6 1241 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 NPHS2Q9NP85 383 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 CHMP2BQ9UQN3 213 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 LRP5O75197 1615 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 CFAP69A5D8W1 941 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 OPLAHO14841 1288 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 GYG2O15488 501 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 TOM1L1O75674 476 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 GRAP2O75791 330 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 CCNE2O96020 404 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 PDGFRAP16234 1089 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 TCF7P36402 384 aaPredicted RBP9.14□□□□□ -0.95
LIG4-204ENST00000611712 ARL4AP40617 200 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 NCKAP1LP55160 1127 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 C1QBPQ07021 282 aaKnown RBP9.14□□□□□ -0.95
LIG4-204ENST00000611712 ORC1Q13415 861 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 TFDP3Q5H9I0 405 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 SPATA18Q8TC71 538 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 PIK3R5Q8WYR1 880 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 ART4Q93070 314 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 CENPTQ96BT3 561 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 CISHQ9NSE2 258 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 WDR35Q9P2L0 1181 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 XPO7Q9UIA9 1087 aaKnown RBP9.14□□□□□ -0.95
LIG4-204ENST00000611712 GGA2Q9UJY4 613 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 FSCN2O14926 492 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 OGTO15294 1046 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 PLA2G6O60733 806 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 HAUS5O94927 633 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 LYPLA2O95372 231 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 PTGER2P43116 358 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 CTCFP49711 727 aaPredicted RBP9.14□□□□□ -0.95
LIG4-204ENST00000611712 ARFIP2P53365 341 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 PTK6Q13882 451 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 ATF7IP2Q5U623 682 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 IER5Q5VY09 327 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 LVRNQ6Q4G3 990 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 MFSD7Q6UXD7 560 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 SPOCD1Q6ZMY3 1216 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 FUKQ8N0W3 1084 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 FAM71DQ8N9W8 422 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 NCAPGQ9BPX3 1015 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 MED10Q9BTT4 135 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 SLC13A1Q9BZW2 595 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 FAM49AQ9H0Q0 323 aaPredicted RBP9.14□□□□□ -0.95
LIG4-204ENST00000611712 AGAP1Q9UPQ3 857 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 ANKRD36CQ5JPF3 1778 aa9.14□□□□□ -0.95
LIG4-204ENST00000611712 TBC1D12O60347 775 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 LUC7L3O95232 432 aaKnown RBP9.13□□□□□ -0.95
LIG4-204ENST00000611712 STAMBPO95630 424 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 KRT4P19013 534 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 CHKAP35790 457 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 RGS7P49802 495 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 TNFAIP2Q03169 654 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 CNGA2Q16280 664 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 EAPPQ56P03 285 aaPredicted RBP9.13□□□□□ -0.95
LIG4-204ENST00000611712 SDCCAG8Q86SQ7 713 aaPredicted RBP9.13□□□□□ -0.95
LIG4-204ENST00000611712 PRUNE1Q86TP1 453 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 SUGP1Q8IWZ8 645 aaKnown RBP9.13□□□□□ -0.95
LIG4-204ENST00000611712 TUBB6Q9BUF5 446 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 RAB6BQ9NRW1 208 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 GGA3Q9NZ52 723 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 PPARGC1AQ9UBK2 798 aaKnown RBP9.13□□□□□ -0.95
LIG4-204ENST00000611712 DNPEPQ9ULA0 475 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 CCDC88AQ3V6T2 1871 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 ZMYM2Q9UBW7 1377 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 GLI3P10071 1580 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 F5H423 210 aaPredicted RBP9.13□□□□□ -0.95
LIG4-204ENST00000611712 DIAPH2O60879 1101 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 ZSCAN5DPP0CG00 497 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 TXNP10599 105 aaKnown RBP9.13□□□□□ -0.95
LIG4-204ENST00000611712 GHRP10912 638 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 GCKP35557 465 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 IREB2P48200 963 aaKnown RBP9.13□□□□□ -0.95
LIG4-204ENST00000611712 ATP13A4Q4VNC1 1196 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 DCAF12L1Q5VU92 463 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 EXOC3L1Q86VI1 746 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 CPNE8Q86YQ8 564 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 HELQQ8TDG4 1101 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 FBXO41Q8TF61 875 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 SNX25Q9H3E2 840 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 METTL5Q9NRN9 209 aaKnown RBP9.13□□□□□ -0.95
LIG4-204ENST00000611712 FZD1Q9UP38 647 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 KRT38O76015 456 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 APRTP07741 180 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 GSTA1P08263 222 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 OSBPP22059 807 aa9.13□□□□□ -0.95
LIG4-204ENST00000611712 OTUD4Q01804 1114 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms