RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 RHPN2P1A8MT19 583 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 DIRC3C9JPN6 131 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 LEFTY2O00292 366 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 TBX3O15119 743 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 FAM20BO75063 409 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 PRSS23O95084 383 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 CKBP12277 381 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 RPL17P18621 184 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 EN2P19622 333 aaPredicted RBP5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 GCSHP23434 173 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 APOBEC3AP31941 199 aaPredicted RBP5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 ZNF135P52742 658 aaPredicted RBP5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 SUMO3P55854 103 aaPredicted RBP5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 IFIT5Q13325 482 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 HABP2Q14520 560 aaPredicted RBP5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 CNGA2Q16280 664 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 NOMO2Q5JPE7 1267 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 ZKSCAN2Q63HK3 967 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 TSHZ3Q63HK5 1081 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 ZNF783Q6ZMS7 281 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 TMIEQ8NEW7 156 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 OR6B3Q8NGW1 331 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 NUP133Q8WUM0 1156 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 SLC25A43Q8WUT9 341 aaPredicted RBP5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 DDX17Q92841 729 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 PHKBQ93100 1093 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 SCAMP4Q969E2 229 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 KLHL32Q96NJ5 620 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 DCLRE1CQ96SD1 692 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 TBCBQ99426 244 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 MPHOSPH6Q99547 160 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 IMPG2Q9BZV3 1241 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 GPR35Q9HC97 309 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 EIF2B4Q9UI10 523 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 SORCS3Q9UPU3 1222 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 MED16Q9Y2X0 877 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 SNX13Q9Y5W8 968 aa5.3□□□□□ -1.56
SMCHD1-213ENST00000609587 PPFIA4O75335 1185 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 SCAF4O95104 1147 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 NUDT3O95989 172 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 LMNAP02545 664 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 PTGS2P35354 604 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 PIK3CBP42338 1070 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 ARFIP2P53365 341 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 AK2P54819 239 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 RNASE9P60153 205 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 FMO1Q01740 532 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 OS9Q13438 667 aaPredicted RBP5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 BIRC2Q13490 618 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 LONRF1Q17RB8 773 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 METRNLQ641Q3 311 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 RHOUQ7L0Q8 258 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 ZNF276Q8N554 614 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 SAMD3Q8N6K7 520 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 CPT1CQ8TCG5 803 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 LENG9Q96B70 501 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 TNIP3Q96KP6 325 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 STRBPQ96SI9 672 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 ELAC2Q9BQ52 826 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 SLC46A2Q9BY10 475 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 SIK2Q9H0K1 926 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 KLHL11Q9NVR0 708 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 CPNE7Q9UBL6 633 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 CORO2BQ9UQ03 480 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 CHST2Q9Y4C5 530 aa5.29□□□□□ -1.56
SMCHD1-213ENST00000609587 AHRRA9YTQ3 701 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 M0QYG6 137 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 MASP2O00187 686 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 TBC1D4O60343 1298 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 UNC5CO95185 931 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 CHEK2O96017 543 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 THP07101 528 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 FCER1AP12319 257 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 ZKSCAN1P17029 563 aaPredicted RBP5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 PTTG1IPP53801 180 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 C21orf58P58505 322 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 MXRA7P84157 204 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 SLFN5Q08AF3 891 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 FAM102AQ5T9C2 384 aaPredicted RBP5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 AGAP9Q5VTM2 703 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 USP37Q86T82 979 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 RHOT2Q8IXI1 618 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 PDPRQ8NCN5 879 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 OR56A1Q8NGH5 318 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 HAS1Q92839 578 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 MARS2Q96GW9 593 aaKnown RBP5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 SLC39A13Q96H72 371 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 RPS6KC1Q96S38 1066 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 NEU1Q99519 415 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 MYD88Q99836 296 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 TLR10Q9BXR5 811 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 TINAGL1Q9GZM7 467 aaPredicted RBP5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 SACM1LQ9NTJ5 587 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 PTGFRNQ9P2B2 879 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 FZD1Q9UP38 647 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 AGAP1Q9UPQ3 857 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 CDYLQ9Y232 598 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 ATP11BQ9Y2G3 1177 aa5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 USP15Q9Y4E8 981 aaPredicted RBP5.28□□□□□ -1.56
SMCHD1-213ENST00000609587 GAGE12BA1L429 117 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms