RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 INTS4Q96HW7 963 aaKnown RBP17.3■□□□□ 0.36
SGMS1-209ENST00000609445 ACCSQ96QU6 501 aa17.3■□□□□ 0.36
SGMS1-209ENST00000609445 BACH2Q9BYV9 841 aa17.3■□□□□ 0.36
SGMS1-209ENST00000609445 NDRG2Q9UN36 371 aaKnown RBP17.3■□□□□ 0.36
SGMS1-209ENST00000609445 NUP210Q8TEM1 1887 aaPredicted RBP17.29■□□□□ 0.36
SGMS1-209ENST00000609445 GOLGA8IPA6NC78 632 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 GOLGA8JA6NMD2 632 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 HEPACAM2A8MVW5 462 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 PAX3P23760 479 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 CSTF1Q05048 431 aaKnown RBP17.29■□□□□ 0.36
SGMS1-209ENST00000609445 WSCD1Q658N2 575 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 SCARA3Q6AZY7 606 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 CCDC73Q6ZRK6 1079 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 DNAJB7Q7Z6W7 309 aaPredicted RBP17.29■□□□□ 0.36
SGMS1-209ENST00000609445 MFSD6LQ8IWD5 586 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 CLDN23Q96B33 292 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 BORCS6Q96GS4 357 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 SEPT5Q99719 369 aaPredicted RBP17.29■□□□□ 0.36
SGMS1-209ENST00000609445 LPIN3Q9BQK8 851 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 MKNK1Q9BUB5 465 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 ZCWPW1Q9H0M4 648 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 EXOC7Q9UPT5 735 aa17.29■□□□□ 0.36
SGMS1-209ENST00000609445 FRYLO94915 3013 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 K7ELQ4 463 aaPredicted RBP17.28■□□□□ 0.36
SGMS1-209ENST00000609445 STX6O43752 255 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 IL18RAPO95256 599 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 TFAMQ00059 246 aaKnown RBP17.28■□□□□ 0.36
SGMS1-209ENST00000609445 ZC3H14Q6PJT7 736 aaKnown RBP17.28■□□□□ 0.36
SGMS1-209ENST00000609445 LRRTM3Q86VH5 581 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 METTL23Q86XA0 190 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 BRSK2Q8IWQ3 736 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 ZNF687Q8N1G0 1237 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 DEPDC1BQ8WUY9 529 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 IRF7Q92985 503 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 PSMG2Q969U7 264 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 NELL2Q99435 816 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 ATXN3LQ9H3M9 355 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 SEMA4AQ9H3S1 761 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 PCIF1Q9H4Z3 704 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 OLFML3Q9NRN5 406 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 PANK4Q9NVE7 773 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 DSEQ9UL01 958 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 MORC2Q9Y6X9 1032 aaPredicted RBP17.28■□□□□ 0.36
SGMS1-209ENST00000609445 CEP250Q9BV73 2442 aa17.28■□□□□ 0.36
SGMS1-209ENST00000609445 DENND4CQ5VZ89 1909 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 KIF26AQ9ULI4 1882 aaPredicted RBP17.27■□□□□ 0.36
SGMS1-209ENST00000609445 FRMD3A2A2Y4 597 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 KPNA7A9QM74 516 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 ZNF263O14978 683 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 PRPF6O94906 941 aaKnown RBP17.27■□□□□ 0.36
SGMS1-209ENST00000609445 ATF6P18850 670 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 GABRR2P28476 465 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 POLR2BP30876 1174 aaKnown RBP17.27■□□□□ 0.36
SGMS1-209ENST00000609445 MAGEA9P43362 315 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 NASPP49321 788 aaPredicted RBP17.27■□□□□ 0.36
SGMS1-209ENST00000609445 POU5F1Q01860 360 aaKnown RBP17.27■□□□□ 0.36
SGMS1-209ENST00000609445 STK38Q15208 465 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 MGAT5BQ3V5L5 792 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 SV2CQ496J9 727 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 TSSK4Q6SA08 328 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 SYCP3Q8IZU3 236 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 THEM5Q8N1Q8 247 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 GLIS3Q8NEA6 775 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 FAM200AQ8TCP9 573 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 GIPC2Q8TF65 315 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 NOC3LQ8WTT2 800 aaKnown RBP17.27■□□□□ 0.36
SGMS1-209ENST00000609445 CBWD1Q9BRT8 395 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 GPR88Q9GZN0 384 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 ZSCAN16Q9H4T2 348 aaPredicted RBP17.27■□□□□ 0.36
SGMS1-209ENST00000609445 TFIP11Q9UBB9 837 aaKnown RBP17.27■□□□□ 0.36
SGMS1-209ENST00000609445 FBXO4Q9UKT5 387 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 MRPS17Q9Y2R5 130 aaKnown RBP17.27■□□□□ 0.36
SGMS1-209ENST00000609445 ASB3Q9Y575 518 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 PCDHB13Q9Y5F0 798 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 PIAS3Q9Y6X2 628 aa17.27■□□□□ 0.36
SGMS1-209ENST00000609445 ZNF638Q14966 1978 aaKnown RBP17.26■□□□□ 0.35
SGMS1-209ENST00000609445 ARNTLO00327 626 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 NCAM2O15394 837 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 ITGB3P05106 788 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 RPS9P46781 194 aaKnown RBP17.26■□□□□ 0.35
SGMS1-209ENST00000609445 TUFMP49411 452 aaKnown RBP17.26■□□□□ 0.35
SGMS1-209ENST00000609445 CYP4F8P98187 520 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 GPR158Q5T848 1215 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 NT5DC4Q86YG4 428 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 ARID3BQ8IVW6 561 aaPredicted RBP17.26■□□□□ 0.35
SGMS1-209ENST00000609445 YAF2Q8IY57 180 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 C1orf127Q8N9H9 656 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 LINC00301Q8NCQ3 95 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 HPS3Q969F9 1004 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 ZNF560Q96MR9 790 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 LRRC3BQ96PB8 259 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 TRPV5Q9NQA5 729 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 TMLHEQ9NVH6 421 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 ABI2Q9NYB9 513 aaPredicted RBP17.26■□□□□ 0.35
SGMS1-209ENST00000609445 RBAKQ9NYW8 714 aaPredicted RBP17.26■□□□□ 0.35
SGMS1-209ENST00000609445 HSFX1Q9UBD0 423 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 AGAP1Q9UPQ3 857 aa17.26■□□□□ 0.35
SGMS1-209ENST00000609445 OBSL1O75147 1896 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 MAN2B1O00754 1011 aa17.25■□□□□ 0.35
SGMS1-209ENST00000609445 PRAMEF12O95522 483 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms