RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 TACC1O75410 805 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 AFPP02771 609 aaKnown RBP15.28■□□□□ 0.04
CTSA-219ENST00000607841 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
CTSA-219ENST00000607841 CPB1P15086 417 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 PCSK1P29120 753 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 ELF1P32519 619 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 LTBRP36941 435 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 MTIF2P46199 727 aaKnown RBP15.28■□□□□ 0.04
CTSA-219ENST00000607841 FMO5P49326 533 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 TSPY1Q01534 308 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 ROR1Q01973 937 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 MYL5Q02045 173 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 KCNH2Q12809 1159 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 SMARCB1Q12824 385 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 PUS10Q3MIT2 529 aaKnown RBP15.28■□□□□ 0.04
CTSA-219ENST00000607841 CBWD6Q4V339 395 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 CBWD3Q5JTY5 395 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 CBWD5Q5RIA9 395 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 LIN9Q5TKA1 542 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 ANKRD54Q6NXT1 300 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 C11orf57Q6ZUT1 292 aaPredicted RBP15.28■□□□□ 0.04
CTSA-219ENST00000607841 RTL10Q7L3V2 364 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 LIMS2Q7Z4I7 341 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 DCP1BQ8IZD4 617 aaKnown RBP15.28■□□□□ 0.04
CTSA-219ENST00000607841 KREMEN2Q8NCW0 462 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 VN1R2Q8NFZ6 395 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 FAXDC2Q96IV6 333 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 ACBD6Q9BR61 282 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 SNX25Q9H3E2 840 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 MAN1C1Q9NR34 630 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 DDX43Q9NXZ2 648 aaKnown RBP15.28■□□□□ 0.04
CTSA-219ENST00000607841 CLEC1BQ9P126 229 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 BARX2Q9UMQ3 279 aaPredicted RBP15.28■□□□□ 0.04
CTSA-219ENST00000607841 COQ4Q9Y3A0 265 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 EYSQ5T1H1 3165 aa15.28■□□□□ 0.04
CTSA-219ENST00000607841 WDR27A2RRH5 827 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 GABRDO14764 452 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 TBX10O75333 385 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 ABLIM3O94929 683 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 ATF2P15336 505 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 WARSP23381 471 aaKnown RBP15.27■□□□□ 0.04
CTSA-219ENST00000607841 EEF1GP26641 437 aaKnown RBP15.27■□□□□ 0.04
CTSA-219ENST00000607841 GNL1P36915 607 aaPredicted RBP15.27■□□□□ 0.04
CTSA-219ENST00000607841 NOP14P78316 857 aaKnown RBP15.27■□□□□ 0.04
CTSA-219ENST00000607841 RBM10P98175 930 aaKnown RBP15.27■□□□□ 0.04
CTSA-219ENST00000607841 DLX2Q07687 328 aaPredicted RBP15.27■□□□□ 0.04
CTSA-219ENST00000607841 GPR17Q13304 367 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 UVSSAQ2YD98 709 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 LEXMQ3ZCV2 418 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 ANO6Q4KMQ2 910 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 CCDC149Q6ZUS6 474 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 IRF2BP1Q8IU81 584 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 ATXN2LQ8WWM7 1075 aaKnown RBP15.27■□□□□ 0.04
CTSA-219ENST00000607841 BPIFA3Q9BQP9 254 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 SFXN1Q9H9B4 322 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 AFF4Q9UHB7 1163 aaKnown RBP15.27■□□□□ 0.04
CTSA-219ENST00000607841 CD207Q9UJ71 328 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 FBXW11Q9UKB1 542 aa15.27■□□□□ 0.04
CTSA-219ENST00000607841 SMTNL1A8MU46 457 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 H3BQ06 376 aaPredicted RBP15.26■□□□□ 0.03
CTSA-219ENST00000607841 CAVIN2O95810 425 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 SPATA31D3P0C874 917 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 ITIH3Q06033 890 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 MAN2A1Q16706 1144 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 ZSCAN23Q3MJ62 389 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 CES5AQ6NT32 575 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 SPATA31D4Q6ZUB0 917 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 ANKRD20A12PQ8NF67 263 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 OR6B3Q8NGW1 331 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 OR10T2Q8NGX3 314 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 C2orf15Q8WU43 125 aaKnown RBP15.26■□□□□ 0.03
CTSA-219ENST00000607841 MSLNLQ96KJ4 702 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 RTP3Q9BQQ7 232 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 PI4K2AQ9BTU6 479 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 DNAI2Q9GZS0 605 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 NIF3L1Q9GZT8 377 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 ZCWPW1Q9H0M4 648 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 CYP3A43Q9HB55 503 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 PRDM6Q9NQX0 595 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 SAMSN1Q9NSI8 373 aaKnown RBP15.26■□□□□ 0.03
CTSA-219ENST00000607841 ZDHHC7Q9NXF8 308 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 CDH9Q9ULB4 789 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 POLIQ9UNA4 740 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 FAM50BQ9Y247 325 aa15.26■□□□□ 0.03
CTSA-219ENST00000607841 KCNJ18B7U540 433 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 PRRG1O14668 218 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 C8AP07357 584 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 TPM2P07951 284 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 TRIM21P19474 475 aaKnown RBP15.25■□□□□ 0.03
CTSA-219ENST00000607841 ZNF165P49910 485 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 MRPS5P82675 430 aaKnown RBP15.25■□□□□ 0.03
CTSA-219ENST00000607841 ADCY1Q08828 1119 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 KCNJ12Q14500 433 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 MAPRE1Q15691 268 aaKnown RBP15.25■□□□□ 0.03
CTSA-219ENST00000607841 NFE2Q16621 373 aaPredicted RBP15.25■□□□□ 0.03
CTSA-219ENST00000607841 SLC39A12Q504Y0 691 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 TCP11X2Q5H9J9 407 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 PPM1LQ5SGD2 360 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 SPOPLQ6IQ16 392 aa15.25■□□□□ 0.03
CTSA-219ENST00000607841 SYCE2Q6PIF2 218 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms