RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 CALCOCO1Q9P1Z2 691 aa11.35□□□□□ -0.59
LINC01001-203ENST00000607448 TNFSF13BQ9Y275 285 aa11.35□□□□□ -0.59
LINC01001-203ENST00000607448 JRKLQ9Y4A0 524 aa11.35□□□□□ -0.59
LINC01001-203ENST00000607448 PCDHA13Q9Y5I0 950 aa11.35□□□□□ -0.59
LINC01001-203ENST00000607448 ZMYM2Q9UBW7 1377 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 POLR3GO15318 223 aaPredicted RBP11.34□□□□□ -0.59
LINC01001-203ENST00000607448 KIF4AO95239 1232 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 CNPP09543 421 aaKnown RBP11.34□□□□□ -0.59
LINC01001-203ENST00000607448 MAPTP10636 758 aaKnown RBP11.34□□□□□ -0.59
LINC01001-203ENST00000607448 KIF11P52732 1056 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 NCKAP1LP55160 1127 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 GIT2Q14161 759 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 DCAF4L1Q3SXM0 396 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 ZNF568Q3ZCX4 644 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 SEZ6Q53EL9 994 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 FUT10Q6P4F1 479 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 ZNF572Q7Z3I7 529 aaPredicted RBP11.34□□□□□ -0.59
LINC01001-203ENST00000607448 ZC3H3Q8IXZ2 948 aaKnown RBP11.34□□□□□ -0.59
LINC01001-203ENST00000607448 NOA1Q8NC60 698 aaKnown RBP11.34□□□□□ -0.59
LINC01001-203ENST00000607448 SLC22A17Q8WUG5 538 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 KLHL5Q96PQ7 755 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 FIZ1Q96SL8 496 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 HERC2P3Q9BVR0 1158 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 TIPINQ9BVW5 301 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 MRPL4Q9BYD3 311 aaKnown RBP11.34□□□□□ -0.59
LINC01001-203ENST00000607448 DEF6Q9H4E7 631 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 MMRN2Q9H8L6 949 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 C17orf75Q9HAS0 396 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 MED4Q9NPJ6 270 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 CEP72Q9P209 647 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 PRKAG3Q9UGI9 489 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 DOCK6Q96HP0 2047 aa11.34□□□□□ -0.59
LINC01001-203ENST00000607448 AKR1B10O60218 316 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 MYBP10242 640 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 HARSP12081 509 aaKnown RBP11.33□□□□□ -0.6
LINC01001-203ENST00000607448 TCP1P17987 556 aaKnown RBP11.33□□□□□ -0.6
LINC01001-203ENST00000607448 SP100P23497 879 aaPredicted RBP11.33□□□□□ -0.6
LINC01001-203ENST00000607448 EIF4A3P38919 411 aaKnown RBP11.33□□□□□ -0.6
LINC01001-203ENST00000607448 CLCN4P51793 760 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 SOX4Q06945 474 aaPredicted RBP11.33□□□□□ -0.6
LINC01001-203ENST00000607448 TUSC3Q13454 348 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 CASP8Q14790 479 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 CCDC40Q4G0X9 1142 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 HSP90B2PQ58FF3 399 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 KIAA0319Q5VV43 1072 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 RNF10Q8N5U6 811 aaKnown RBP11.33□□□□□ -0.6
LINC01001-203ENST00000607448 FAM71BQ8TC56 605 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 SPIRE2Q8WWL2 714 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 BAP1Q92560 729 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 HPS3Q969F9 1004 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 PPP1R10Q96QC0 940 aaKnown RBP11.33□□□□□ -0.6
LINC01001-203ENST00000607448 LACRTQ9GZZ8 138 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 KCND2Q9NZV8 630 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 ARHGAP20Q9P2F6 1191 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 ADAM28Q9UKQ2 775 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 FAM50BQ9Y247 325 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 FRMD3A2A2Y4 597 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 CARNS1A5YM72 827 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 RCCD1A6NED2 376 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 FAM86C2PA6NEL3 165 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 ENC1O14682 589 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 THP07101 528 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 GRM5P41594 1212 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 ZNF131P52739 623 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 CBX2Q14781 532 aaPredicted RBP11.33□□□□□ -0.6
LINC01001-203ENST00000607448 EDRF1Q3B7T1 1238 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 RTP2Q5QGT7 225 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 MPZL3Q6UWV2 235 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 ALKAL1Q6UXT8 129 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 RRAGAQ7L523 313 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 CACNA2D4Q7Z3S7 1137 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 HAUS6Q7Z4H7 955 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 GLYCTKQ8IVS8 523 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 MMGT1Q8N4V1 131 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 C3orf58Q8NDZ4 430 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 CASP10Q92851 521 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 ZMAT2Q96NC0 199 aaKnown RBP11.33□□□□□ -0.6
LINC01001-203ENST00000607448 MMS19Q96T76 1030 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 IKZF4Q9H2S9 585 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 MRPL17Q9NRX2 175 aaKnown RBP11.33□□□□□ -0.6
LINC01001-203ENST00000607448 CHST7Q9NS84 486 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 FAM207AQ9NSI2 230 aaPredicted RBP11.33□□□□□ -0.6
LINC01001-203ENST00000607448 ANKFY1Q9P2R3 1169 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 RAPGEFL1Q9UHV5 662 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 ODF2LQ9ULJ1 636 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 SNX12Q9UMY4 172 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 HYOU1Q9Y4L1 999 aa11.33□□□□□ -0.6
LINC01001-203ENST00000607448 MYO10Q9HD67 2058 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 SMIM28A0A1B0GU29 152 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 LRRC53A6NM62 1247 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 LOC730098B7Z3J9 87 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 PI4K2BG5E9Z4 385 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 TEX28O15482 410 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 SERPING1P05155 500 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 URODP06132 367 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 RPL17P18621 184 aaKnown RBP11.32□□□□□ -0.6
LINC01001-203ENST00000607448 KLRC2P26717 231 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 NMT1P30419 496 aaKnown RBP11.32□□□□□ -0.6
LINC01001-203ENST00000607448 MAGEA1P43355 309 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 GLUD2P49448 558 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms