RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 GTF3C4Q9UKN8 822 aa16.26■□□□□ 0.19
RER1-209ENST00000605895 SMG5Q9UPR3 1016 aaKnown RBP16.26■□□□□ 0.19
RER1-209ENST00000605895 TOGARAM1Q9Y4F4 1720 aa16.26■□□□□ 0.19
RER1-209ENST00000605895 ROBO3Q96MS0 1386 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 LDHCP07864 332 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 VAV1P15498 845 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 AQP4P55087 323 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 ACAP1Q15027 740 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 BMT2Q1RMZ1 405 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 C1orf186Q6ZWK4 172 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 ARID3BQ8IVW6 561 aaPredicted RBP16.25■□□□□ 0.19
RER1-209ENST00000605895 ACAP3Q96P50 834 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 SLC7A8Q9UHI5 535 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 PCDHGB4Q9UN71 923 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 PCDHGB5Q9Y5G0 923 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 AK5Q9Y6K8 562 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 MROH7Q68CQ1 1323 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 PRPF4O43172 522 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■■■□□ 18.8
RER1-209ENST00000605895 ZNF862O60290 1169 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 TCEA3O75764 348 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 CFBP00751 764 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 CYP1A2P05177 515 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 CDK7P50613 346 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 GALK1P51570 392 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 ATXN3P54252 364 aaPredicted RBP16.25■□□□□ 0.19
RER1-209ENST00000605895 GPX6P59796 221 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 PABPC1LQ4VXU2 614 aaKnown RBP16.25■□□□□ 0.19
RER1-209ENST00000605895 RHPN2Q8IUC4 686 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 ST13P4Q8IZP2 240 aaPredicted RBP16.25■□□□□ 0.19
RER1-209ENST00000605895 NAT14Q8WUY8 206 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 MTBPQ96DY7 904 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 SLC13A1Q9BZW2 595 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 ZNF212Q9UDV6 495 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 ANGPTL2Q9UKU9 493 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 PHF24Q9UPV7 400 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 TDRKHQ9Y2W6 561 aaKnown RBP16.25■□□□□ 0.19
RER1-209ENST00000605895 UMODL1Q5DID0 1318 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 SPATA31A1Q5TZJ5 1347 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 KIAA1551Q9HCM1 1747 aa16.25■□□□□ 0.19
RER1-209ENST00000605895 ZSCAN9O15535 394 aaPredicted RBP16.24■□□□□ 0.19
RER1-209ENST00000605895 LPXNO60711 386 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 CIB2O75838 187 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 CDK16Q00536 496 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 CMPK2Q5EBM0 449 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 ANKRD22Q5VYY1 191 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 PRPF39Q86UA1 669 aaKnown RBP16.24■□□□□ 0.19
RER1-209ENST00000605895 ZCCHC9Q8N567 271 aaKnown RBP16.24■□□□□ 0.19
RER1-209ENST00000605895 DDX27Q96GQ7 796 aaKnown RBP16.24■□□□□ 0.19
RER1-209ENST00000605895 PAFAH2Q99487 392 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 GPRC5CQ9NQ84 441 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 CYB561D2O14569 222 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 RARBP10826 455 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 RHBDL3P58872 404 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 ZCCHC23Q6ZST2 131 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 ULK2Q8IYT8 1036 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 CCDC110Q8TBZ0 833 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 TAS1R2Q8TE23 839 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 PYROXD1Q8WU10 500 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 FIZ1Q96SL8 496 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 ANKRD2Q9GZV1 360 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 ARHGEF4Q9NR80 690 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 PSMC3IPQ9P2W1 217 aaPredicted RBP16.24■□□□□ 0.19
RER1-209ENST00000605895 ACTL7BQ9Y614 415 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 RIMBP2O15034 1052 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 PEX2P28328 305 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 SERPINB6P35237 376 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 GRAMD1BQ3KR37 738 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 RALGPS1Q5JS13 557 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 C1orf220Q5T0J3 134 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 GCNAQ96QF7 691 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 FAM192AQ9GZU8 254 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 OLFML3Q9NRN5 406 aa16.24■□□□□ 0.19
RER1-209ENST00000605895 PLSCR1O15162 318 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 ZMPSTE24O75844 475 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 HADHBP55084 474 aaKnown RBP16.23■□□□□ 0.19
RER1-209ENST00000605895 ASPHQ12797 758 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 LSAMPQ13449 338 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 FNBP1LQ5T0N5 605 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 ACBD5Q5T8D3 534 aaPredicted RBP16.23■□□□□ 0.19
RER1-209ENST00000605895 PTF1AQ7RTS3 328 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 AZIN2Q96A70 460 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 VAV3Q9UKW4 847 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 ADAMTSL3P82987 1691 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 MYH11P35749 1972 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 PRR5-ARHGAP8B1AHC4 643 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 ADRB2P07550 413 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 HNRNPCP07910 306 aaKnown RBP eCLIP16.23■□□□□ 0.19
RER1-209ENST00000605895 ARHGAP8P85298 464 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 TXNRD3NBQ6F5E7 133 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 PIP4K2CQ8TBX8 421 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 SERAC1Q96JX3 654 aa16.23■□□□□ 0.19
RER1-209ENST00000605895 TOP3BO95985 862 aaKnown RBP16.22■□□□□ 0.19
RER1-209ENST00000605895 MT-ND3P03897 115 aa16.22■□□□□ 0.19
RER1-209ENST00000605895 FAM163BP0C2L3 166 aa16.22■□□□□ 0.19
RER1-209ENST00000605895 PPP4CP60510 307 aa16.22■□□□□ 0.19
RER1-209ENST00000605895 CAV1Q03135 178 aa16.22■□□□□ 0.19
RER1-209ENST00000605895 MED21Q13503 144 aa16.22■□□□□ 0.19
RER1-209ENST00000605895 MMEL1Q495T6 779 aa16.22■□□□□ 0.19
RER1-209ENST00000605895 SYDE2Q5VT97 1194 aa16.22■□□□□ 0.19
RER1-209ENST00000605895 RBM44Q6ZP01 1051 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms