RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 SOWAHAQ2M3V2 549 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 STXBP5Q5T5C0 1151 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 KRBA2Q6ZNG9 492 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 UBALD2Q8IYN6 164 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 FBXL6Q8N531 539 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 CSGALNACT2Q8N6G5 542 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 KBTBD7Q8WVZ9 684 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 ERCC4Q92889 916 aaPredicted RBP11.51□□□□□ -0.57
TUBE1-210ENST00000604967 MCRS1Q96EZ8 462 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 MFSD14AQ96MC6 490 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 KXD1Q9BQD3 176 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 LPIN3Q9BQK8 851 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 LRRC27Q9C0I9 530 aa11.51□□□□□ -0.57
TUBE1-210ENST00000604967 AVENQ9NQS1 362 aaPredicted RBP11.51□□□□□ -0.57
TUBE1-210ENST00000604967 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.51□□□□□ -0.57
TUBE1-210ENST00000604967 OR6C75A6NL08 312 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
TUBE1-210ENST00000604967 XPOTO43592 962 aaKnown RBP11.5□□□□□ -0.57
TUBE1-210ENST00000604967 ATP2C2O75185 946 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 XYLBO75191 536 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 ZNF202O95125 648 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 LDHAP00338 332 aaKnown RBP11.5□□□□□ -0.57
TUBE1-210ENST00000604967 RPN1P04843 607 aaKnown RBP11.5□□□□□ -0.57
TUBE1-210ENST00000604967 CFHP08603 1231 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 ACAT1P24752 427 aaKnown RBP11.5□□□□□ -0.57
TUBE1-210ENST00000604967 LMO2P25791 158 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 SYKP43405 635 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 DLG4P78352 724 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 TCF15Q12870 199 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 BFSP1Q12934 665 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 MYBPC2Q14324 1141 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 SLC39A12Q504Y0 691 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 TANGO2Q6ICL3 276 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 GAREM2Q75VX8 874 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 TRAPPC11Q7Z392 1133 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 USP37Q86T82 979 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 NT5DC4Q86YG4 428 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 GPIHBP1Q8IV16 184 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 C12orf56Q8IXR9 622 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 SMYD4Q8IYR2 804 aaPredicted RBP11.5□□□□□ -0.57
TUBE1-210ENST00000604967 CEP57L1Q8IYX8 460 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 FMR1NBQ8N0W7 255 aaPredicted RBP11.5□□□□□ -0.57
TUBE1-210ENST00000604967 SHKBP1Q8TBC3 707 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 GPR152Q8TDT2 470 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 LRRC3BQ96PB8 259 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 PHOX2BQ99453 314 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 GDAP2Q9NXN4 497 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 IGSF9Q9P2J2 1179 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 MAPK8IP1Q9UQF2 711 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 UBE4BO95155 1302 aa11.5□□□□□ -0.57
TUBE1-210ENST00000604967 ZNF233A6NK53 670 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 GABRDO14764 452 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 VNN1O95497 513 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 PTPN2P17706 415 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 AVPR2P30518 371 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 GPC5P78333 572 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 PSMD6Q15008 389 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 TEAD2Q15562 447 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 FAM78AQ5JUQ0 283 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 SDHAF4Q5VUM1 108 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 ELMSAN1Q6PJG2 1045 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 RTL10Q7L3V2 364 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 TMEM150AQ86TG1 271 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 LRRC52Q8N7C0 313 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 XXYLT1Q8NBI6 393 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 CCDC127Q96BQ5 260 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 CGRRF1Q99675 332 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 SCAND2PQ9GZW5 306 aaPredicted RBP11.49□□□□□ -0.57
TUBE1-210ENST00000604967 XYLT2Q9H1B5 865 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 IL21Q9HBE4 155 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 TMEM30AQ9NV96 361 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 ITGA11Q9UKX5 1188 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 MRPS23Q9Y3D9 190 aaKnown RBP11.49□□□□□ -0.57
TUBE1-210ENST00000604967 VPS13AQ96RL7 3174 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 USP34Q70CQ2 3546 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 COL4A2P08572 1712 aa11.49□□□□□ -0.57
TUBE1-210ENST00000604967 MYBPHLA2RUH7 354 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 LRRIQ3A6PVS8 624 aaPredicted RBP11.48□□□□□ -0.57
TUBE1-210ENST00000604967 GADD45BO75293 160 aaPredicted RBP11.48□□□□□ -0.57
TUBE1-210ENST00000604967 LRRN2O75325 713 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 RHOBTB3O94955 611 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 LRG1P02750 347 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 KRT19P08727 400 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 DLATP10515 647 aaKnown RBP11.48□□□□□ -0.57
TUBE1-210ENST00000604967 SRFP11831 508 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 MYL4P12829 197 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 GLULP15104 373 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 HMGA1P17096 107 aaKnown RBP11.48□□□□□ -0.57
TUBE1-210ENST00000604967 ELF1P32519 619 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 CLDN10P78369 228 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 RBP5P82980 135 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 PNOCQ13519 176 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 SV2CQ496J9 727 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 ZCWPW2Q504Y3 356 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 TDRD10Q5VZ19 366 aaKnown RBP11.48□□□□□ -0.57
TUBE1-210ENST00000604967 DNAJB7Q7Z6W7 309 aaPredicted RBP11.48□□□□□ -0.57
TUBE1-210ENST00000604967 WDR49Q8IV35 697 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 SIX5Q8N196 739 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 HPDLQ96IR7 371 aa11.48□□□□□ -0.57
TUBE1-210ENST00000604967 MRPL45Q9BRJ2 306 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms