RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TRIM67Q6ZTA4 783 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 ELMOD1Q8N336 334 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 PDCL2Q8N4E4 241 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 ITFG1Q8TB96 612 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 RSAD2Q8WXG1 361 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 ING5Q8WYH8 240 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 ZNF516Q92618 1163 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 HPDLQ96IR7 371 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 ZNF512Q96ME7 567 aaPredicted RBP15.5■□□□□ 0.07
TUBE1-208ENST00000604743 CRISPLD1Q9H336 500 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 KCNK12Q9HB15 430 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 DMAC2Q9NW81 257 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.5■□□□□ 0.07
TUBE1-208ENST00000604743 L1RE1Q9UN81 338 aa15.5■□□□□ 0.07
TUBE1-208ENST00000604743 MRPS23Q9Y3D9 190 aaKnown RBP15.5■□□□□ 0.07
TUBE1-208ENST00000604743 PHACTR2O75167 634 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 SOAT2O75908 522 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 CST3P01034 146 aaPredicted RBP15.49■□□□□ 0.07
TUBE1-208ENST00000604743 POU2F2P09086 479 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 LAMP2P13473 410 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 ACAT1P24752 427 aaKnown RBP15.49■□□□□ 0.07
TUBE1-208ENST00000604743 TRPC3Q13507 836 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 IQCEQ6IPM2 695 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 CENPPQ6IPU0 288 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 SLC9A9Q8IVB4 645 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 HS6ST3Q8IZP7 471 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 GUF1Q8N442 669 aaKnown RBP15.49■□□□□ 0.07
TUBE1-208ENST00000604743 TTC9BQ8N6N2 239 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 PLEKHO2Q8TD55 490 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 SMARCE1Q969G3 411 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 MMS19Q96T76 1030 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 SEPT5Q99719 369 aaPredicted RBP15.49■□□□□ 0.07
TUBE1-208ENST00000604743 ZCWPW1Q9H0M4 648 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 RMND1Q9NWS8 449 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 DDX43Q9NXZ2 648 aaKnown RBP15.49■□□□□ 0.07
TUBE1-208ENST00000604743 EPS15L1Q9UBC2 864 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 HOOK1Q9UJC3 728 aaKnown RBP15.49■□□□□ 0.07
TUBE1-208ENST00000604743 MAFFQ9ULX9 164 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 FRMD4BQ9Y2L6 1034 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 YIPF1Q9Y548 306 aa15.49■□□□□ 0.07
TUBE1-208ENST00000604743 TMEM221A6NGB7 291 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 LRRIQ3A6PVS8 624 aaPredicted RBP15.48■□□□□ 0.07
TUBE1-208ENST00000604743 PRR33A8MZF0 331 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 M0R296 226 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 KINO60870 393 aaKnown RBP15.48■□□□□ 0.07
TUBE1-208ENST00000604743 SMC2O95347 1197 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 MYL4P12829 197 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 NR2F2P24468 414 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 ALDH1A3P47895 512 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 MYL7Q01449 175 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 TSPY1Q01534 308 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 BIRC3Q13489 604 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 SLC5A9Q2M3M2 681 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 MGAT5BQ3V5L5 792 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 ISM2Q6H9L7 571 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 LRRTM3Q86VH5 581 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 OSTM1Q86WC4 334 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 DCP1BQ8IZD4 617 aaKnown RBP15.48■□□□□ 0.07
TUBE1-208ENST00000604743 ADGRF2Q8IZF7 708 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 TMEM86AQ8N2M4 240 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 PARD3BQ8TEW8 1205 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 FGF13Q92913 245 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 MCRS1Q96EZ8 462 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 TIGD1Q96MW7 591 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 GZF1Q9H116 711 aaPredicted RBP15.48■□□□□ 0.07
TUBE1-208ENST00000604743 GDAP2Q9NXN4 497 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 CEP72Q9P209 647 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 RAPGEFL1Q9UHV5 662 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 CDH7Q9ULB5 785 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 TRAF3IP3Q9Y228 551 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 PCDHA5Q9Y5H7 936 aa15.48■□□□□ 0.07
TUBE1-208ENST00000604743 HCRTO43612 131 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 COL9A1P20849 921 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 EPHB3P54753 998 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 DLG4P78352 724 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 SIGLEC14Q08ET2 396 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 PLD1Q13393 1074 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 TDGQ13569 410 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 SOWAHAQ2M3V2 549 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 CYP4A22Q5TCH4 519 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 ZNF658Q5TYW1 1059 aaPredicted RBP15.47■□□□□ 0.07
TUBE1-208ENST00000604743 HFE2Q6ZVN8 426 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 PDZD4Q76G19 769 aaPredicted RBP15.47■□□□□ 0.07
TUBE1-208ENST00000604743 TOP6BLQ8N6T0 577 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 FAM200AQ8TCP9 573 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 PBXIP1Q96AQ6 731 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 TCEAL4Q96EI5 215 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 GSDMAQ96QA5 445 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 TMLHEQ9NVH6 421 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 ABI2Q9NYB9 513 aaPredicted RBP15.47■□□□□ 0.07
TUBE1-208ENST00000604743 IGSF9Q9P2J2 1179 aa15.47■□□□□ 0.07
TUBE1-208ENST00000604743 GJA1P17302 382 aa15.46■□□□□ 0.07
TUBE1-208ENST00000604743 CEBPBP17676 345 aa15.46■□□□□ 0.07
TUBE1-208ENST00000604743 RPL13P26373 211 aaKnown RBP15.46■□□□□ 0.07
TUBE1-208ENST00000604743 PRCPP42785 496 aa15.46■□□□□ 0.07
TUBE1-208ENST00000604743 LHX1P48742 406 aa15.46■□□□□ 0.07
TUBE1-208ENST00000604743 MYL6P60660 151 aa15.46■□□□□ 0.07
TUBE1-208ENST00000604743 TNNC1P63316 161 aa15.46■□□□□ 0.07
TUBE1-208ENST00000604743 ADAM9Q13443 819 aa15.46■□□□□ 0.07
TUBE1-208ENST00000604743 TDRD10Q5VZ19 366 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms