RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 AKAP3O75969 853 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 LRG1P02750 347 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 ALADP13716 330 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 RPL13P26373 211 aaKnown RBP17.98■□□□□ 0.47
SSBP4-213ENST00000602088 DLG4P78352 724 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 ADAM9Q13443 819 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 SOWAHAQ2M3V2 549 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 CENPPQ6IPU0 288 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 DPH6Q7L8W6 267 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 LIMS2Q7Z4I7 341 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 ADSSL1Q8N142 457 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 TMEM86AQ8N2M4 240 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 TOP6BLQ8N6T0 577 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 ZCWPW1Q9H0M4 648 aa17.98■□□□□ 0.47
SSBP4-213ENST00000602088 DNMT3BQ9UBC3 853 aaKnown RBP17.98■□□□□ 0.47
SSBP4-213ENST00000602088 MTMR11A4FU01 709 aa17.97■□□□□ 0.47
SSBP4-213ENST00000602088 PSMC2P35998 433 aaKnown RBP17.97■□□□□ 0.47
SSBP4-213ENST00000602088 NTHL1P78549 312 aa17.97■□□□□ 0.47
SSBP4-213ENST00000602088 ISM2Q6H9L7 571 aa17.97■□□□□ 0.47
SSBP4-213ENST00000602088 SPATA18Q8TC71 538 aa17.97■□□□□ 0.47
SSBP4-213ENST00000602088 IPO9Q96P70 1041 aaKnown RBP17.97■□□□□ 0.47
SSBP4-213ENST00000602088 PGLYRP2Q96PD5 576 aa17.97■□□□□ 0.47
SSBP4-213ENST00000602088 MYADMQ96S97 322 aa17.97■□□□□ 0.47
SSBP4-213ENST00000602088 CRISPLD1Q9H336 500 aa17.97■□□□□ 0.47
SSBP4-213ENST00000602088 HCFC1R1Q9NWW0 138 aa17.97■□□□□ 0.47
SSBP4-213ENST00000602088 LIMD1Q9UGP4 676 aa17.97■□□□□ 0.47
SSBP4-213ENST00000602088 MAN1B1Q9UKM7 699 aa17.97■□□□□ 0.47
SSBP4-213ENST00000602088 MYO10Q9HD67 2058 aa17.97■□□□□ 0.47
SSBP4-213ENST00000602088 IKBKBO14920 756 aa17.96■□□□□ 0.47
SSBP4-213ENST00000602088 STAU1O95793 577 aaKnown RBP17.96■□□□□ 0.47
SSBP4-213ENST00000602088 C4BPAP04003 597 aaKnown RBP17.96■□□□□ 0.47
SSBP4-213ENST00000602088 PTPN2P17706 415 aa17.96■□□□□ 0.47
SSBP4-213ENST00000602088 FSHRP23945 695 aa17.96■□□□□ 0.47
SSBP4-213ENST00000602088 MCCD1P59942 119 aaPredicted RBP17.96■□□□□ 0.47
SSBP4-213ENST00000602088 DUSP4Q13115 394 aa17.96■□□□□ 0.47
SSBP4-213ENST00000602088 TRPC3Q13507 836 aa17.96■□□□□ 0.47
SSBP4-213ENST00000602088 SLC39A12Q504Y0 691 aa17.96■□□□□ 0.47
SSBP4-213ENST00000602088 C1orf220Q5T0J3 134 aa17.96■□□□□ 0.47
SSBP4-213ENST00000602088 TDRD10Q5VZ19 366 aaKnown RBP17.96■□□□□ 0.47
SSBP4-213ENST00000602088 LRRTM3Q86VH5 581 aa17.96■□□□□ 0.47
SSBP4-213ENST00000602088 FAM186BQ8IYM0 893 aa17.96■□□□□ 0.47
SSBP4-213ENST00000602088 ATAD1Q8NBU5 361 aa17.96■□□□□ 0.47
SSBP4-213ENST00000602088 DDX43Q9NXZ2 648 aaKnown RBP17.96■□□□□ 0.47
SSBP4-213ENST00000602088 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.96■□□□□ 0.478e-7■■■■□ 20.4
SSBP4-213ENST00000602088 HSFX1Q9UBD0 423 aa17.96■□□□□ 0.47
SSBP4-213ENST00000602088 NOTCH4Q99466 2003 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 GABRDO14764 452 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 PHACTR2O75167 634 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 VNN1O95497 513 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 BMP6P22004 513 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 ATICP31939 592 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 GBP2P32456 591 aaPredicted RBP17.95■□□□□ 0.46
SSBP4-213ENST00000602088 LHX1P48742 406 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 VAMP7P51809 220 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 PMS1P54277 932 aaKnown RBP17.95■□□□□ 0.46
SSBP4-213ENST00000602088 MYL6P60660 151 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 TWF1Q12792 350 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 SMARCB1Q12824 385 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 BIRC3Q13489 604 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 MORC3Q14149 939 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 PABPC1LQ4VXU2 614 aaKnown RBP17.95■□□□□ 0.46
SSBP4-213ENST00000602088 INTS8Q75QN2 995 aaKnown RBP17.95■□□□□ 0.46
SSBP4-213ENST00000602088 OSTM1Q86WC4 334 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 DCP1BQ8IZD4 617 aaKnown RBP17.95■□□□□ 0.46
SSBP4-213ENST00000602088 ADGRF2Q8IZF7 708 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 KBTBD7Q8WVZ9 684 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 EEF2KMTQ96G04 330 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 ACBD6Q9BR61 282 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 XYLT2Q9H1B5 865 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 AVENQ9NQS1 362 aaPredicted RBP17.95■□□□□ 0.46
SSBP4-213ENST00000602088 CEP72Q9P209 647 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 SLC27A5Q9Y2P5 690 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 YIPF1Q9Y548 306 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 DOCK8Q8NF50 2099 aa17.95■□□□□ 0.46
SSBP4-213ENST00000602088 CETN3O15182 167 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 RHOP08100 348 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 LAMP2P13473 410 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 CD44P16070 742 aaKnown RBP17.94■□□□□ 0.46
SSBP4-213ENST00000602088 MYL7Q01449 175 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 TSPY1Q01534 308 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 ENPEPQ07075 957 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 STIM1Q13586 685 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 PTPN21Q16825 1174 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 WDR72Q3MJ13 1102 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 ZACNQ401N2 412 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 ANKRD40Q6AI12 368 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 GET4Q7L5D6 327 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-213ENST00000602088 TTC9BQ8N6N2 239 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 C2orf15Q8WU43 125 aaKnown RBP17.94■□□□□ 0.46
SSBP4-213ENST00000602088 SYAP1Q96A49 352 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-213ENST00000602088 DHTKD1Q96HY7 919 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-213ENST00000602088 ZNF512Q96ME7 567 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-213ENST00000602088 MMS19Q96T76 1030 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 TSG101Q99816 390 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 MKNK1Q9BUB5 465 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 C1QTNF1Q9BXJ1 281 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 VRTNQ9H8Y1 702 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 EPS15L1Q9UBC2 864 aa17.94■□□□□ 0.46
SSBP4-213ENST00000602088 BIN1O00499 593 aa17.93■□□□□ 0.46
SSBP4-213ENST00000602088 PSMA7O14818 248 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms