RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 GCNAQ96QF7 691 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 SH2D3AQ9BRG2 576 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 RANBP17Q9H2T7 1088 aaKnown RBP16.95■□□□□ 0.3
SYDE1-204ENST00000600440 TRPM3Q9HCF6 1732 aaPredicted RBP16.95■□□□□ 0.3
SYDE1-204ENST00000600440 PIK3CDO00329 1044 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 LPXNO60711 386 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
SYDE1-204ENST00000600440 ATP13A4Q4VNC1 1196 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 PAOXQ6QHF9 649 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 PTF1AQ7RTS3 328 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 ARID3BQ8IVW6 561 aaPredicted RBP16.95■□□□□ 0.3
SYDE1-204ENST00000600440 TUBB6Q9BUF5 446 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 MECRQ9BV79 373 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 ZNF510Q9Y2H8 683 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 A8MXQ7 604 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 E5RJQ4 531 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 EML1O00423 815 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 AKR1B1P15121 316 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 RPA1P27694 616 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 RXRBP28702 533 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 HOXA13P31271 388 aaPredicted RBP16.94■□□□□ 0.3
SYDE1-204ENST00000600440 HPCAP84074 193 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 FMO1Q01740 532 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 RNF168Q8IYW5 571 aaPredicted RBP16.94■□□□□ 0.3
SYDE1-204ENST00000600440 ZCCHC9Q8N567 271 aaKnown RBP16.94■□□□□ 0.3
SYDE1-204ENST00000600440 NCSTNQ92542 709 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 PARVGQ9HBI0 331 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 GINM1Q9NU53 330 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 ARAP2Q8WZ64 1704 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 UBR2Q8IWV8 1755 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 SPECC1L-ADORA2AF8WAN1 911 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 MAN1A1P33908 653 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 RPS8P62241 208 aaKnown RBP16.94■□□□□ 0.3
SYDE1-204ENST00000600440 ARHGAP4P98171 946 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 SLC25A3Q00325 362 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 STK32BQ9NY57 414 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 DNPEPQ9ULA0 475 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 MTO1Q9Y2Z2 717 aaKnown RBP16.94■□□□□ 0.3
SYDE1-204ENST00000600440 ROBO3Q96MS0 1386 aa16.94■□□□□ 0.3
SYDE1-204ENST00000600440 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 HADHBP55084 474 aaKnown RBP16.93■□□□□ 0.3
SYDE1-204ENST00000600440 PASD1Q8IV76 773 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 SKA1Q96BD8 255 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 EIF2AK1Q9BQI3 630 aaKnown RBP16.93■□□□□ 0.3
SYDE1-204ENST00000600440 YIPF2Q9BWQ6 316 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 KCNK13Q9HB14 408 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 APPL1Q9UKG1 709 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 GTF3C4Q9UKN8 822 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 PACSIN3Q9UKS6 424 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 MYH11P35749 1972 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 TRPA1O75762 1119 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 PABPC4LP0CB38 370 aaKnown RBP16.93■□□□□ 0.3
SYDE1-204ENST00000600440 UBXN2AP68543 259 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 IRX4P78413 519 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 CBX3Q13185 183 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 MPP3Q13368 585 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 PDK3Q15120 406 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 DUS1LQ6P1R4 473 aaKnown RBP16.93■□□□□ 0.3
SYDE1-204ENST00000600440 SLFN12Q8IYM2 578 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 BBOF1Q8ND07 529 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 HSPBAP1Q96EW2 488 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 PAFAH2Q99487 392 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 DDX43Q9NXZ2 648 aaKnown RBP16.93■□□□□ 0.3
SYDE1-204ENST00000600440 BOLA2-SMG1P6H3BVE0 249 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 CAMTA2O94983 1202 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 MT-ND3P03897 115 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 ALCAMQ13740 583 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 UBAP2LQ14157 1087 aaKnown RBP16.93■□□□□ 0.3
SYDE1-204ENST00000600440 BBS9Q3SYG4 887 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 RABGAP1LQ5R372 815 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 IYDQ6PHW0 289 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 TRIM67Q6ZTA4 783 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 ACAD11Q709F0 780 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 ANKS1BQ7Z6G8 1248 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 TMPRSS6Q8IU80 811 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 STKLD1Q8NE28 680 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 GDPD5Q8WTR4 605 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 PYROXD1Q8WU10 500 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 IQCGQ9H095 443 aaKnown RBP16.93■□□□□ 0.3
SYDE1-204ENST00000600440 SENP1Q9P0U3 644 aa16.93■□□□□ 0.3
SYDE1-204ENST00000600440 SGK1O00141 431 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 PDLIM1O00151 329 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 ATP2A1O14983 1001 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 DNAJC6O75061 913 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 VCLP18206 1134 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 DYNLT1P63172 113 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 ASPRV1Q53RT3 343 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 C3orf62Q6ZUJ4 267 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 ETNPPLQ8TBG4 499 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 ACAP3Q96P50 834 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 KLHL4Q9C0H6 718 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 HEMK1Q9Y5R4 338 aaPredicted RBP16.92■□□□□ 0.3
SYDE1-204ENST00000600440 FAM86B1E9PN63 330 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 FAM86B2P0C5J1 330 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 CRABP2P29373 138 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 TRMT5Q32P41 509 aaKnown RBP16.92■□□□□ 0.3
SYDE1-204ENST00000600440 C16orf86Q6ZW13 317 aa16.92■□□□□ 0.3
SYDE1-204ENST00000600440 SYDE1Q6ZW31 735 aaPredicted RBP16.92■□□□□ 0.3
SYDE1-204ENST00000600440 MORC4Q8TE76 937 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms