RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TRPV5Q9NQA5 729 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 ITGA11Q9UKX5 1188 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 CFAP45Q9UL16 551 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 ANK1P16157 1881 aa17.05■□□□□ 0.32
VRK3-221ENST00000600284 DCNP07585 359 aaKnown RBP17.04■□□□□ 0.32
VRK3-221ENST00000600284 PSMC3P17980 439 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 SURF1Q15526 300 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 SLC39A12Q504Y0 691 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 WSCD1Q658N2 575 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 DNAJB7Q7Z6W7 309 aaPredicted RBP17.04■□□□□ 0.32
VRK3-221ENST00000600284 TMC8Q8IU68 726 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 C1orf210Q8IVY1 113 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 DCP1BQ8IZD4 617 aaKnown RBP17.04■□□□□ 0.32
VRK3-221ENST00000600284 C1orf127Q8N9H9 656 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 ZSWIM2Q8NEG5 633 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 SHKBP1Q8TBC3 707 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 ZSCAN18Q8TBC5 510 aaPredicted RBP17.04■□□□□ 0.32
VRK3-221ENST00000600284 SPPL2BQ8TCT7 592 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 IRF7Q92985 503 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 DHX58Q96C10 678 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 ZSWIM3Q96MP5 696 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 FOXQ1Q9C009 403 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 KIAA1586Q9HCI6 787 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 AGAP1Q9UPQ3 857 aa17.04■□□□□ 0.32
VRK3-221ENST00000600284 SCN1AP35498 2009 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 NRG2O14511 850 aaPredicted RBP17.03■□□□□ 0.32
VRK3-221ENST00000600284 NCAM2O15394 837 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 ITGB3P05106 788 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 WNT7BP56706 349 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 SNRPFP62306 86 aaKnown RBP17.03■□□□□ 0.32
VRK3-221ENST00000600284 ASIC1P78348 528 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 RBP5P82980 135 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 TEAD2Q15562 447 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 ZNF852Q6ZMS4 543 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 MFSD6LQ8IWD5 586 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 TMEM86AQ8N2M4 240 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 CSGALNACT2Q8N6G5 542 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 CXorf38Q8TB03 319 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 SPATA18Q8TC71 538 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 ZNF507Q8TCN5 953 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 BCO2Q9BYV7 579 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 SEMA4AQ9H3S1 761 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 PCIF1Q9H4Z3 704 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 BRD9Q9H8M2 597 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 LTB4R2Q9NPC1 389 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 GDAP2Q9NXN4 497 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 FAM13BQ9NYF5 915 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 PCDHA7Q9UN72 937 aa17.03■□□□□ 0.32
VRK3-221ENST00000600284 MRPS17Q9Y2R5 130 aaKnown RBP17.03■□□□□ 0.32
VRK3-221ENST00000600284 A0A1W2PRU2 124 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 GOLGA8IPA6NC78 632 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 ZNF233A6NK53 670 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 GOLGA8JA6NMD2 632 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 FAM170BA6NMN3 283 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 MAN2B1O00754 1011 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 POLR2DO15514 142 aaKnown RBP17.02■□□□□ 0.32
VRK3-221ENST00000600284 HUS1O60921 280 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 GLULP15104 373 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 GJA1P17302 382 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 WEE1P30291 646 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 POLR2BP30876 1174 aaKnown RBP17.02■□□□□ 0.32
VRK3-221ENST00000600284 VEPH1Q14D04 833 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 FOXD4L5Q5VV16 416 aaPredicted RBP17.02■□□□□ 0.32
VRK3-221ENST00000600284 VITQ6UXI7 678 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 UNC13DQ70J99 1090 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 EPM2AIP1Q7L775 607 aaPredicted RBP17.02■□□□□ 0.32
VRK3-221ENST00000600284 FRMD5Q7Z6J6 570 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 LRRTM3Q86VH5 581 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 TTC9BQ8N6N2 239 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 FOXD4L4Q8WXT5 416 aaPredicted RBP17.02■□□□□ 0.32
VRK3-221ENST00000600284 NKD2Q969F2 451 aaPredicted RBP17.02■□□□□ 0.32
VRK3-221ENST00000600284 ACBD6Q9BR61 282 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 SLITRK6Q9H5Y7 841 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 PDE11AQ9HCR9 933 aa17.02■□□□□ 0.32
VRK3-221ENST00000600284 USP34Q70CQ2 3546 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 UBE4BO95155 1302 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 PRR23AA6NEV1 266 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 TMEM191BP0C7N4 346 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 HAPLN1P10915 354 aaPredicted RBP17.01■□□□□ 0.31
VRK3-221ENST00000600284 HOXD13P35453 343 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 ME1P48163 572 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 MLLT6P55198 1093 aaPredicted RBP17.01■□□□□ 0.31
VRK3-221ENST00000600284 TSPY1Q01534 308 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 EHHADHQ08426 723 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 GRM2Q14416 872 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 UBXN2BQ14CS0 331 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 NFE2Q16621 373 aaPredicted RBP17.01■□□□□ 0.31
VRK3-221ENST00000600284 MGAT5BQ3V5L5 792 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 FAM26FQ5R3K3 315 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 RESP18Q5W5W9 173 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 TPRG1Q6ZUI0 275 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 GAREM2Q75VX8 874 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 DPH6Q7L8W6 267 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 ASCL5Q7RTU5 278 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 GLIS3Q8NEA6 775 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 CLDN23Q96B33 292 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 ANKRD36BP1Q96IX9 119 aa17.01■□□□□ 0.31
VRK3-221ENST00000600284 SEPT5Q99719 369 aaPredicted RBP17.01■□□□□ 0.31
VRK3-221ENST00000600284 ZNF334Q9HCZ1 680 aaPredicted RBP17.01■□□□□ 0.31
VRK3-221ENST00000600284 HEBP1Q9NRV9 189 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms