RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 AKAP3O75969 853 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 LRG1P02750 347 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 ALADP13716 330 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 RPL13P26373 211 aaKnown RBP17.98■□□□□ 0.47
SSBP4-204ENST00000597724 DLG4P78352 724 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 ADAM9Q13443 819 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 SOWAHAQ2M3V2 549 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 CENPPQ6IPU0 288 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 DPH6Q7L8W6 267 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 LIMS2Q7Z4I7 341 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 ADSSL1Q8N142 457 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 TMEM86AQ8N2M4 240 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 TOP6BLQ8N6T0 577 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 ZCWPW1Q9H0M4 648 aa17.98■□□□□ 0.47
SSBP4-204ENST00000597724 DNMT3BQ9UBC3 853 aaKnown RBP17.98■□□□□ 0.47
SSBP4-204ENST00000597724 MTMR11A4FU01 709 aa17.97■□□□□ 0.47
SSBP4-204ENST00000597724 PSMC2P35998 433 aaKnown RBP17.97■□□□□ 0.47
SSBP4-204ENST00000597724 NTHL1P78549 312 aa17.97■□□□□ 0.47
SSBP4-204ENST00000597724 ISM2Q6H9L7 571 aa17.97■□□□□ 0.47
SSBP4-204ENST00000597724 SPATA18Q8TC71 538 aa17.97■□□□□ 0.47
SSBP4-204ENST00000597724 IPO9Q96P70 1041 aaKnown RBP17.97■□□□□ 0.47
SSBP4-204ENST00000597724 PGLYRP2Q96PD5 576 aa17.97■□□□□ 0.47
SSBP4-204ENST00000597724 MYADMQ96S97 322 aa17.97■□□□□ 0.47
SSBP4-204ENST00000597724 CRISPLD1Q9H336 500 aa17.97■□□□□ 0.47
SSBP4-204ENST00000597724 HCFC1R1Q9NWW0 138 aa17.97■□□□□ 0.47
SSBP4-204ENST00000597724 LIMD1Q9UGP4 676 aa17.97■□□□□ 0.47
SSBP4-204ENST00000597724 MAN1B1Q9UKM7 699 aa17.97■□□□□ 0.47
SSBP4-204ENST00000597724 MYO10Q9HD67 2058 aa17.97■□□□□ 0.47
SSBP4-204ENST00000597724 IKBKBO14920 756 aa17.96■□□□□ 0.47
SSBP4-204ENST00000597724 STAU1O95793 577 aaKnown RBP17.96■□□□□ 0.47
SSBP4-204ENST00000597724 C4BPAP04003 597 aaKnown RBP17.96■□□□□ 0.47
SSBP4-204ENST00000597724 PTPN2P17706 415 aa17.96■□□□□ 0.47
SSBP4-204ENST00000597724 FSHRP23945 695 aa17.96■□□□□ 0.47
SSBP4-204ENST00000597724 MCCD1P59942 119 aaPredicted RBP17.96■□□□□ 0.47
SSBP4-204ENST00000597724 DUSP4Q13115 394 aa17.96■□□□□ 0.47
SSBP4-204ENST00000597724 TRPC3Q13507 836 aa17.96■□□□□ 0.47
SSBP4-204ENST00000597724 SLC39A12Q504Y0 691 aa17.96■□□□□ 0.47
SSBP4-204ENST00000597724 C1orf220Q5T0J3 134 aa17.96■□□□□ 0.47
SSBP4-204ENST00000597724 TDRD10Q5VZ19 366 aaKnown RBP17.96■□□□□ 0.47
SSBP4-204ENST00000597724 LRRTM3Q86VH5 581 aa17.96■□□□□ 0.47
SSBP4-204ENST00000597724 FAM186BQ8IYM0 893 aa17.96■□□□□ 0.47
SSBP4-204ENST00000597724 ATAD1Q8NBU5 361 aa17.96■□□□□ 0.47
SSBP4-204ENST00000597724 DDX43Q9NXZ2 648 aaKnown RBP17.96■□□□□ 0.47
SSBP4-204ENST00000597724 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.96■□□□□ 0.479e-7■■■■□ 19.7
SSBP4-204ENST00000597724 HSFX1Q9UBD0 423 aa17.96■□□□□ 0.47
SSBP4-204ENST00000597724 NOTCH4Q99466 2003 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 GABRDO14764 452 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 PHACTR2O75167 634 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 VNN1O95497 513 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 BMP6P22004 513 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 ATICP31939 592 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 GBP2P32456 591 aaPredicted RBP17.95■□□□□ 0.46
SSBP4-204ENST00000597724 LHX1P48742 406 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 VAMP7P51809 220 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 PMS1P54277 932 aaKnown RBP17.95■□□□□ 0.46
SSBP4-204ENST00000597724 MYL6P60660 151 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 TWF1Q12792 350 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 SMARCB1Q12824 385 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 BIRC3Q13489 604 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 MORC3Q14149 939 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 PABPC1LQ4VXU2 614 aaKnown RBP17.95■□□□□ 0.46
SSBP4-204ENST00000597724 INTS8Q75QN2 995 aaKnown RBP17.95■□□□□ 0.46
SSBP4-204ENST00000597724 OSTM1Q86WC4 334 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 DCP1BQ8IZD4 617 aaKnown RBP17.95■□□□□ 0.46
SSBP4-204ENST00000597724 ADGRF2Q8IZF7 708 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 KBTBD7Q8WVZ9 684 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 EEF2KMTQ96G04 330 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 ACBD6Q9BR61 282 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 XYLT2Q9H1B5 865 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 AVENQ9NQS1 362 aaPredicted RBP17.95■□□□□ 0.46
SSBP4-204ENST00000597724 CEP72Q9P209 647 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 SLC27A5Q9Y2P5 690 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 YIPF1Q9Y548 306 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 DOCK8Q8NF50 2099 aa17.95■□□□□ 0.46
SSBP4-204ENST00000597724 CETN3O15182 167 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 RHOP08100 348 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 LAMP2P13473 410 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 CD44P16070 742 aaKnown RBP17.94■□□□□ 0.46
SSBP4-204ENST00000597724 MYL7Q01449 175 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 TSPY1Q01534 308 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 ENPEPQ07075 957 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 STIM1Q13586 685 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 PTPN21Q16825 1174 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 WDR72Q3MJ13 1102 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 ZACNQ401N2 412 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 ANKRD40Q6AI12 368 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 GET4Q7L5D6 327 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-204ENST00000597724 TTC9BQ8N6N2 239 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 C2orf15Q8WU43 125 aaKnown RBP17.94■□□□□ 0.46
SSBP4-204ENST00000597724 SYAP1Q96A49 352 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-204ENST00000597724 DHTKD1Q96HY7 919 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-204ENST00000597724 ZNF512Q96ME7 567 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-204ENST00000597724 MMS19Q96T76 1030 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 TSG101Q99816 390 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 MKNK1Q9BUB5 465 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 C1QTNF1Q9BXJ1 281 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 VRTNQ9H8Y1 702 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 EPS15L1Q9UBC2 864 aa17.94■□□□□ 0.46
SSBP4-204ENST00000597724 BIN1O00499 593 aa17.93■□□□□ 0.46
SSBP4-204ENST00000597724 PSMA7O14818 248 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms