RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 MRPS17Q9Y2R5 130 aaKnown RBP17.28■□□□□ 0.36
USHBP1-205ENST00000595993 STYXL1Q9Y6J8 313 aa17.28■□□□□ 0.36
USHBP1-205ENST00000595993 KMT2BQ9UMN6 2715 aaPredicted RBP17.28■□□□□ 0.36
USHBP1-205ENST00000595993 GOLGA6L4A6NEF3 574 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 H7C4K7 107 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 PRRG1O14668 218 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 ZNF197O14709 1029 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 MOSPD3O75425 235 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 CXCL8P10145 99 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 ADSSP30520 456 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 ALCAMQ13740 583 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 SLC10A6Q3KNW5 377 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 KMT5BQ4FZB7 885 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 GPR161Q8N6U8 529 aaKnown RBP17.27■□□□□ 0.36
USHBP1-205ENST00000595993 ACAP3Q96P50 834 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 CORO1BQ9BR76 489 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 IER2Q9BTL4 223 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 MSTO1Q9BUK6 570 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 CHRDQ9H2X0 955 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 TRPV4Q9HBA0 871 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 PCDHB13Q9Y5F0 798 aa17.27■□□□□ 0.36
USHBP1-205ENST00000595993 TICRRQ7Z2Z1 1910 aa17.27■□□□□ 0.35
USHBP1-205ENST00000595993 OGTO15294 1046 aa17.26■□□□□ 0.35
USHBP1-205ENST00000595993 TGM1P22735 817 aa17.26■□□□□ 0.35
USHBP1-205ENST00000595993 ELF1P32519 619 aa17.26■□□□□ 0.35
USHBP1-205ENST00000595993 FAM160A1Q05DH4 1040 aa17.26■□□□□ 0.35
USHBP1-205ENST00000595993 DPYDQ12882 1025 aa17.26■□□□□ 0.35
USHBP1-205ENST00000595993 MTAPQ13126 283 aa17.26■□□□□ 0.35
USHBP1-205ENST00000595993 ATRIPQ8WXE1 791 aa17.26■□□□□ 0.35
USHBP1-205ENST00000595993 C18orf25Q96B23 403 aaPredicted RBP17.26■□□□□ 0.35
USHBP1-205ENST00000595993 CYP4F11Q9HBI6 524 aa17.26■□□□□ 0.35
USHBP1-205ENST00000595993 ZFP14Q9HCL3 533 aa17.26■□□□□ 0.35
USHBP1-205ENST00000595993 SLC39A2Q9NP94 309 aa17.26■□□□□ 0.35
USHBP1-205ENST00000595993 AFF4Q9UHB7 1163 aaKnown RBP17.26■□□□□ 0.35
USHBP1-205ENST00000595993 SMG5Q9UPR3 1016 aaKnown RBP17.26■□□□□ 0.35
USHBP1-205ENST00000595993 EXOC7Q9UPT5 735 aa17.26■□□□□ 0.35
USHBP1-205ENST00000595993 F5P12259 2224 aa17.26■□□□□ 0.35
USHBP1-205ENST00000595993 EPG5Q9HCE0 2579 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 ARNTLO00327 626 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 MAN2B1O00754 1011 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 EIF3DO15371 548 aaKnown RBP eCLIP17.25■□□□□ 0.35
USHBP1-205ENST00000595993 MYL1P05976 194 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 CLTAP09496 248 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 ENOX2Q16206 610 aaKnown RBP17.25■□□□□ 0.35
USHBP1-205ENST00000595993 RSPO4Q2I0M5 234 aaPredicted RBP17.25■□□□□ 0.35
USHBP1-205ENST00000595993 VITQ6UXI7 678 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 PDZD4Q76G19 769 aaPredicted RBP17.25■□□□□ 0.35
USHBP1-205ENST00000595993 TMEM130Q8N3G9 435 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 LEMD2Q8NC56 503 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 KIAA0895Q8NCT3 520 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 ZSWIM2Q8NEG5 633 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 BEST2Q8NFU1 509 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 ZNF507Q8TCN5 953 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 SCFD1Q8WVM8 642 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 SMARCD2Q92925 531 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 ZSWIM3Q96MP5 696 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 ZNF334Q9HCZ1 680 aaPredicted RBP17.25■□□□□ 0.35
USHBP1-205ENST00000595993 CEP72Q9P209 647 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 NCDNQ9UBB6 729 aa17.25■□□□□ 0.35
USHBP1-205ENST00000595993 CPSF3Q9UKF6 684 aaKnown RBP17.25■□□□□ 0.35
USHBP1-205ENST00000595993 NCANO14594 1321 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 TTC26A0AVF1 554 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 RPN1P04843 607 aaKnown RBP17.24■□□□□ 0.35
USHBP1-205ENST00000595993 SDHBP21912 280 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 ACOT2P49753 483 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 MLLT6P55198 1093 aaPredicted RBP17.24■□□□□ 0.35
USHBP1-205ENST00000595993 STK4Q13043 487 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 GRM2Q14416 872 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 CTXN3Q4LDR2 81 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 SLFN12LQ6IEE8 588 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 ZNF280DQ6N043 979 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 TSSK4Q6SA08 328 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 CRELD2Q6UXH1 353 aaPredicted RBP17.24■□□□□ 0.35
USHBP1-205ENST00000595993 STXBP4Q6ZWJ1 553 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 SYCP3Q8IZU3 236 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 DEPDC1BQ8WUY9 529 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 POMGNT1Q8WZA1 660 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 IRF7Q92985 503 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 CBWD1Q9BRT8 395 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 TRMT61BQ9BVS5 477 aaKnown RBP17.24■□□□□ 0.35
USHBP1-205ENST00000595993 TMEM206Q9H813 350 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 BRD9Q9H8M2 597 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 EXOC1Q9NV70 894 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 AGO2Q9UKV8 859 aaKnown RBP17.24■□□□□ 0.35
USHBP1-205ENST00000595993 PCDHB8Q9UN66 801 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 NUB1Q9Y5A7 615 aa17.24■□□□□ 0.35
USHBP1-205ENST00000595993 UBE4BO95155 1302 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 M0QZQ0 153 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 OAZ2O95190 189 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 VNN2O95498 520 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 PSMC3P17980 439 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 AARSP49588 968 aaKnown RBP eCLIP17.23■□□□□ 0.35
USHBP1-205ENST00000595993 ARPP19P56211 112 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 SPAG1Q07617 926 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 PNOCQ13519 176 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 POSTNQ15063 836 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 BMT2Q1RMZ1 405 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 CYP4A22Q5TCH4 519 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 NELFCDQ8IXH7 590 aa17.23■□□□□ 0.35
USHBP1-205ENST00000595993 HS6ST3Q8IZP7 471 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms