RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 ADCY1Q08828 1119 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 PUS10Q3MIT2 529 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 DCAF17Q5H9S7 520 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 TCERG1LQ5VWI1 586 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 SPOPLQ6IQ16 392 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 GPR149Q86SP6 731 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 ADGRF2Q8IZF7 708 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 KBTBD7Q8WVZ9 684 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 ZNF707Q96C28 371 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 MRPL45Q9BRJ2 306 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 PI4K2AQ9BTU6 479 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 CRISPLD1Q9H336 500 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 PLEKHA4Q9H4M7 779 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 POMKQ9H5K3 350 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 DDX43Q9NXZ2 648 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 TMEM63CQ9P1W3 806 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 NXF1Q9UBU9 619 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 DSEQ9UL01 958 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 NME7Q9Y5B8 376 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 OBSL1O75147 1896 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 GREB1Q4ZG55 1949 aa14.8□□□□□ -0.04
SHKBP1-207ENST00000595631 ARHGEF37A1IGU5 675 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 OR6C75A6NL08 312 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 IKBKBO14920 756 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 SP100P23497 879 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 RAP1GAPP47736 663 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 ITIH3Q06033 890 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 CBX2Q14781 532 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 ZNF699Q32M78 642 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 WDR72Q3MJ13 1102 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 CCDC40Q4G0X9 1142 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 PPM1LQ5SGD2 360 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 LIN9Q5TKA1 542 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 DENND4CQ5VZ89 1909 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 CES5AQ6NT32 575 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 SCARA5Q6ZMJ2 495 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 RBM43Q6ZSC3 357 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 LIMS2Q7Z4I7 341 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 LRRTM3Q86VH5 581 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 THEM5Q8N1Q8 247 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 TTC9BQ8N6N2 239 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 TOP6BLQ8N6T0 577 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 MLKLQ8NB16 471 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 TAS1R2Q8TE23 839 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 HDAC7Q8WUI4 952 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 SMG7Q92540 1137 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 CEP63Q96MT8 703 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 MMS19Q96T76 1030 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 SRRTQ9BXP5 876 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 ZCWPW1Q9H0M4 648 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 SMYD3Q9H7B4 428 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 CYP4F11Q9HBI6 524 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 RWDD2AQ9UIY3 292 aa14.79□□□□□ -0.04
SHKBP1-207ENST00000595631 MTMR11A4FU01 709 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 PRRG1O14668 218 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 C1RP00736 705 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 ATF2P15336 505 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 LMO2P25791 158 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 ATICP31939 592 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 CDH8P55286 799 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 MCCD1P59942 119 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 TNNC1P63316 161 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 ENPEPQ07075 957 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 GPR17Q13304 367 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 CBWD6Q4V339 395 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 SLC39A12Q504Y0 691 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 ZNF667Q5HYK9 610 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 CBWD3Q5JTY5 395 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 CBWD5Q5RIA9 395 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 TPGS2Q68CL5 300 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 ELMSAN1Q6PJG2 1045 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 FOXR2Q6PJQ5 311 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 FILIP1Q7Z7B0 1213 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 TMEM86AQ8N2M4 240 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 ATAD1Q8NBU5 361 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 CMASQ8NFW8 434 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 SEMA4DQ92854 862 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 SLC35C1Q96A29 364 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 SYAP1Q96A49 352 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 COL25A1Q9BXS0 654 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 PRKD2Q9BZL6 878 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 SDCBP2Q9H190 292 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 TMEM8AQ9HCN3 771 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 CD320Q9NPF0 282 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 TMLHEQ9NVH6 421 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 ZDHHC7Q9NXF8 308 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 ARMCX3Q9UH62 379 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 AFF4Q9UHB7 1163 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 FAM50BQ9Y247 325 aa14.78□□□□□ -0.04
SHKBP1-207ENST00000595631 MYO10Q9HD67 2058 aa14.77□□□□□ -0.04
SHKBP1-207ENST00000595631 ZNF638Q14966 1978 aaKnown RBP14.77□□□□□ -0.04
SHKBP1-207ENST00000595631 GABRDO14764 452 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 ATP2C2O75185 946 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 SOAT2O75908 522 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 STAU1O95793 577 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 ASS1P00966 412 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 ELF1P32519 619 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 MTHFRP42898 656 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 MXI1P50539 228 aa14.77□□□□□ -0.05
SHKBP1-207ENST00000595631 PSMC1P62191 440 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms