RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 RSPO2Q6UXX9 243 aaPredicted RBP24.15■■□□□ 1.46
SNRNP70-204ENST00000595231 SCARA5Q6ZMJ2 495 aa24.15■■□□□ 1.46
SNRNP70-204ENST00000595231 OSTM1Q86WC4 334 aa24.15■■□□□ 1.46
SNRNP70-204ENST00000595231 ARHGEF19Q8IW93 802 aa24.15■■□□□ 1.46
SNRNP70-204ENST00000595231 ADGRF2Q8IZF7 708 aa24.15■■□□□ 1.46
SNRNP70-204ENST00000595231 DEFB123Q8N688 67 aa24.15■■□□□ 1.46
SNRNP70-204ENST00000595231 NT5C1BQ96P26 610 aa24.15■■□□□ 1.46
SNRNP70-204ENST00000595231 ARID3AQ99856 593 aa24.15■■□□□ 1.46
SNRNP70-204ENST00000595231 RXFP1Q9HBX9 757 aa24.15■■□□□ 1.46
SNRNP70-204ENST00000595231 SIX2Q9NPC8 291 aa24.15■■□□□ 1.46
SNRNP70-204ENST00000595231 MTRRQ9UBK8 725 aa24.15■■□□□ 1.46
SNRNP70-204ENST00000595231 SSX2IPQ9Y2D8 614 aa24.15■■□□□ 1.46
SNRNP70-204ENST00000595231 WEE2P0C1S8 567 aa24.14■■□□□ 1.45
SNRNP70-204ENST00000595231 RAP1GAPP47736 663 aa24.14■■□□□ 1.45
SNRNP70-204ENST00000595231 PSMD5Q16401 504 aa24.14■■□□□ 1.45
SNRNP70-204ENST00000595231 ERGIC2Q96RQ1 377 aa24.14■■□□□ 1.45
SNRNP70-204ENST00000595231 CLSTN3Q9BQT9 956 aa24.14■■□□□ 1.45
SNRNP70-204ENST00000595231 LMCD1Q9NZU5 365 aa24.14■■□□□ 1.45
SNRNP70-204ENST00000595231 SIK3Q9Y2K2 1263 aa24.14■■□□□ 1.45
SNRNP70-204ENST00000595231 NME7Q9Y5B8 376 aa24.14■■□□□ 1.45
SNRNP70-204ENST00000595231 BACE2Q9Y5Z0 518 aa24.14■■□□□ 1.45
SNRNP70-204ENST00000595231 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 CNPP09543 421 aaKnown RBP24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 RPL17P18621 184 aaKnown RBP24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 WARSP23381 471 aaKnown RBP24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 UBASH3AP57075 661 aa24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 BMS1Q14692 1282 aaKnown RBP24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 FILIP1LQ4L180 1135 aa24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 PDXDC1Q6P996 788 aa24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 METTL23Q86XA0 190 aa24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 SPATA18Q8TC71 538 aa24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 CYP3A43Q9HB55 503 aa24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 FNIP2Q9P278 1114 aa24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 FBXL5Q9UKA1 691 aa24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 MTCH2Q9Y6C9 303 aa24.13■■□□□ 1.45
SNRNP70-204ENST00000595231 ADAM12O43184 909 aa24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 HCRTO43612 131 aa24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 LMO2P25791 158 aa24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 KLK7P49862 253 aa24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 CUL2Q13617 745 aa24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 CTXN3Q4LDR2 81 aa24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 RRAGAQ7L523 313 aa24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 PPM1KQ8N3J5 372 aa24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 KAT5Q92993 513 aa24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 GUCD1Q96NT3 240 aa24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 CDX2Q99626 313 aaPredicted RBP24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.12■■□□□ 1.453e-21■■■□□ 15.8
SNRNP70-204ENST00000595231 IFNKQ9P0W0 207 aa24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 APEX2Q9UBZ4 518 aa24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 PRRC2BQ5JSZ5 2229 aaKnown RBP24.12■■□□□ 1.45
SNRNP70-204ENST00000595231 EYSQ5T1H1 3165 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 H7C4K7 107 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 TEX28O15482 410 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 AP5Z1O43299 807 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 LHX1P48742 406 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 GCNT1Q02742 428 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 SYCP1Q15431 976 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 SLC8B1Q6J4K2 584 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 ZNF280DQ6N043 979 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 GJB7Q6PEY0 223 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 ADGRD2Q7Z7M1 963 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 OR10T2Q8NGX3 314 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 KLHL5Q96PQ7 755 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 MTMR10Q9NXD2 777 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 DDX43Q9NXZ2 648 aaKnown RBP24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 STXBP5LQ9Y2K9 1186 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 CA8P35219 290 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 GNL1P36915 607 aaPredicted RBP24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 PTPN21Q16825 1174 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 KREMEN1Q96MU8 473 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 UBE2TQ9NPD8 197 aaPredicted RBP24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 PLCB1Q9NQ66 1216 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 CDY1Q9Y6F8 540 aa24.11■■□□□ 1.45
SNRNP70-204ENST00000595231 TBXAS1P24557 533 aaPredicted RBP24.1■■□□□ 1.45
SNRNP70-204ENST00000595231 INCA1Q0VD86 236 aa24.1■■□□□ 1.45
SNRNP70-204ENST00000595231 KLHDC7AQ5VTJ3 777 aa24.1■■□□□ 1.45
SNRNP70-204ENST00000595231 THEM5Q8N1Q8 247 aa24.1■■□□□ 1.45
SNRNP70-204ENST00000595231 UBR7Q8N806 425 aa24.1■■□□□ 1.45
SNRNP70-204ENST00000595231 OR6B3Q8NGW1 331 aa24.1■■□□□ 1.45
SNRNP70-204ENST00000595231 TMEM209Q96SK2 561 aa24.1■■□□□ 1.45
SNRNP70-204ENST00000595231 ACBD6Q9BR61 282 aa24.1■■□□□ 1.45
SNRNP70-204ENST00000595231 LSM14BQ9BX40 385 aaKnown RBP24.1■■□□□ 1.45
SNRNP70-204ENST00000595231 CISHQ9NSE2 258 aa24.1■■□□□ 1.45
SNRNP70-204ENST00000595231 NOL4O94818 638 aa24.09■■□□□ 1.45
SNRNP70-204ENST00000595231 OR1D2P34982 312 aa24.09■■□□□ 1.45
SNRNP70-204ENST00000595231 WHAMMQ8TF30 809 aa24.09■■□□□ 1.45
SNRNP70-204ENST00000595231 MYLIPQ8WY64 445 aa24.09■■□□□ 1.45
SNRNP70-204ENST00000595231 GAS2L1Q99501 681 aaPredicted RBP24.09■■□□□ 1.45
SNRNP70-204ENST00000595231 OXCT2Q9BYC2 517 aaPredicted RBP24.09■■□□□ 1.45
SNRNP70-204ENST00000595231 XPO4Q9C0E2 1151 aaKnown RBP24.09■■□□□ 1.45
SNRNP70-204ENST00000595231 SNX25Q9H3E2 840 aa24.09■■□□□ 1.45
SNRNP70-204ENST00000595231 AJAP1Q9UKB5 411 aaPredicted RBP24.09■■□□□ 1.45
SNRNP70-204ENST00000595231 BARX2Q9UMQ3 279 aaPredicted RBP24.09■■□□□ 1.45
SNRNP70-204ENST00000595231 OR6C75A6NL08 312 aa24.08■■□□□ 1.45
SNRNP70-204ENST00000595231 PDGFRBP09619 1106 aa24.08■■□□□ 1.45
SNRNP70-204ENST00000595231 CD58P19256 250 aa24.08■■□□□ 1.45
SNRNP70-204ENST00000595231 ACO1P21399 889 aaKnown RBP24.08■■□□□ 1.45
SNRNP70-204ENST00000595231 IGFBP4P22692 258 aa24.08■■□□□ 1.45
SNRNP70-204ENST00000595231 ACAT1P24752 427 aaKnown RBP24.08■■□□□ 1.45
SNRNP70-204ENST00000595231 NDUFV1P49821 464 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms