RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 RPA3P35244 121 aaPredicted RBP13.97□□□□□ -0.17
VRK3-209ENST00000594948 PIK3CAP42336 1068 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 GEMIN4P57678 1058 aaKnown RBP13.97□□□□□ -0.17
VRK3-209ENST00000594948 SLC1A5Q15758 541 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 SPOCD1Q6ZMY3 1216 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 AEBP2Q6ZN18 517 aaPredicted RBP13.97□□□□□ -0.17
VRK3-209ENST00000594948 PRUNE1Q86TP1 453 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 LONP2Q86WA8 852 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 CCDC125Q86Z20 511 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 KIRREL3Q8IZU9 778 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 ZNF75CPQ92670 426 aaPredicted RBP13.97□□□□□ -0.17
VRK3-209ENST00000594948 DHRS4Q9BTZ2 278 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 KIFC3Q9BVG8 833 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 FHDC1Q9C0D6 1143 aaPredicted RBP13.97□□□□□ -0.17
VRK3-209ENST00000594948 VPS37BQ9H9H4 285 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 GRID1Q9ULK0 1009 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 EFR3BQ9Y2G0 817 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 TCP10L2B9ZVM9 353 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 DGAT1O75907 488 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 STBD1O95210 358 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 CALCAP01258 141 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 KRT1P04264 644 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 CALB1P05937 261 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 ACADSP16219 412 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 ATP6V1C1P21283 382 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 CALRP27797 417 aaKnown RBP13.97□□□□□ -0.17
VRK3-209ENST00000594948 ADCY1Q08828 1119 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 GPS1Q13098 491 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 KLHL38Q2WGJ6 581 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 LLGL2Q6P1M3 1020 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 NLRP9Q7RTR0 991 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 OTOAQ7RTW8 1153 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 LMNTD2Q8IXW0 634 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 SUPT20HQ8NEM7 779 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 ARMC2Q8NEN0 867 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 ASAP3Q8TDY4 903 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 ATP6V0A1Q93050 837 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 ZNF622Q969S3 477 aaKnown RBP eCLIP13.97□□□□□ -0.17
VRK3-209ENST00000594948 SPDL1Q96EA4 605 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 FNBP1Q96RU3 617 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 SH2D3AQ9BRG2 576 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 DCLRE1BQ9H816 532 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 SLCO1B3Q9NPD5 702 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 ANKFY1Q9P2R3 1169 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 ZNF70Q9UC06 446 aaPredicted RBP13.97□□□□□ -0.17
VRK3-209ENST00000594948 NKX1-2Q9UD57 310 aaPredicted RBP13.97□□□□□ -0.17
VRK3-209ENST00000594948 ZFP69BQ9UJL9 534 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 USTQ9Y2C2 406 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 FARP1Q9Y4F1 1045 aaPredicted RBP13.97□□□□□ -0.17
VRK3-209ENST00000594948 PCDHB4Q9Y5E5 795 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 PCDHA10Q9Y5I2 948 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 hCG_1818297A0A087WSY0 165 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 MAFGO15525 162 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 IL1BP01584 269 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 PIGRP01833 764 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 MMP8P22894 467 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 MARK3P27448 753 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 ABL2P42684 1182 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 RAD23BP54727 409 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 MRPS35P82673 323 aaKnown RBP13.96□□□□□ -0.17
VRK3-209ENST00000594948 TDRD10Q5VZ19 366 aaKnown RBP13.96□□□□□ -0.17
VRK3-209ENST00000594948 LVRNQ6Q4G3 990 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 ADGRD1Q6QNK2 874 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 PHLDB2Q86SQ0 1253 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 NLRX1Q86UT6 975 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 NIPA2Q8N8Q9 360 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 RBBP8NLQ8NC74 664 aaPredicted RBP13.96□□□□□ -0.17
VRK3-209ENST00000594948 SPOCK2Q92563 424 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 TAAR1Q96RJ0 339 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 NUDCD1Q96RS6 583 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 FAM118BQ9BPY3 351 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 PDCD2LQ9BRP1 358 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 VPS11Q9H270 941 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 ZFATQ9P243 1243 aa13.96□□□□□ -0.17
VRK3-209ENST00000594948 ZMYND8Q9ULU4 1186 aaPredicted RBP13.96□□□□□ -0.17
VRK3-209ENST00000594948 FER1L6Q2WGJ9 1857 aa13.96□□□□□ -0.18
VRK3-209ENST00000594948 DOCK5Q9H7D0 1870 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 TCRBV5S1A1TA0A578 114 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 E7ESA3 106 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 DNAJC6O75061 913 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 ATP9AO75110 1047 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 VNN1O95497 513 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 LSM8O95777 96 aaKnown RBP13.95□□□□□ -0.18
VRK3-209ENST00000594948 ASNSP08243 561 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 SSR1P43307 286 aaKnown RBP13.95□□□□□ -0.18
VRK3-209ENST00000594948 ZNF132P52740 706 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 MAP3K10Q02779 954 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 PIGHQ14442 188 aaPredicted RBP13.95□□□□□ -0.18
VRK3-209ENST00000594948 LBRQ14739 615 aaKnown RBP13.95□□□□□ -0.18
VRK3-209ENST00000594948 ZYXQ15942 572 aaKnown RBP13.95□□□□□ -0.18
VRK3-209ENST00000594948 TSNAXIP1Q2TAA8 658 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 SPDYE2Q495Y8 402 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 TBC1D10BQ4KMP7 808 aaPredicted RBP13.95□□□□□ -0.18
VRK3-209ENST00000594948 TFDP3Q5H9I0 405 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 DAB2IPQ5VWQ8 1189 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 MFSD7Q6UXD7 560 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 TAS1R3Q7RTX0 852 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 SEPT12Q8IYM1 358 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 ZBED8Q8IZ13 594 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 C4orf33Q8N1A6 199 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms