RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 MTMR11A4FU01 709 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 FGF19O95750 216 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 RPN1P04843 607 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 OR4Q2P0C623 313 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 TUFMP49411 452 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 CYP2J2P51589 502 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 TSPY1Q01534 308 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 BFSP1Q12934 665 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 PSMD6Q15008 389 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 CENPPQ6IPU0 288 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 KRBA2Q6ZNG9 492 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 ITIH5Q86UX2 942 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 SLC44A3Q8N4M1 653 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 TOP6BLQ8N6T0 577 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 SPPL2BQ8TCT7 592 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 BORCS6Q96GS4 357 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 PGLYRP2Q96PD5 576 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 CGRRF1Q99675 332 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 ZCWPW1Q9H0M4 648 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 MFSD1Q9H3U5 465 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 WNT16Q9UBV4 365 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 FBXL21Q9UKT6 434 aa19.09■□□□□ 0.65
SHKBP1-204ENST00000594862 PDXKO00764 312 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 EXOC3O60645 756 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 AP3M2P53677 418 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 EPHA5P54756 1037 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 MYL7Q01449 175 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 CYP24A1Q07973 514 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 STK4Q13043 487 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 VEPH1Q14D04 833 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 NFE2Q16621 373 aaPredicted RBP19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 WSCD1Q658N2 575 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 DPH6Q7L8W6 267 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 SLC9A9Q8IVB4 645 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 KIAA0895Q8NCT3 520 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 OR10T2Q8NGX3 314 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 ITFG1Q8TB96 612 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 GPR88Q9GZN0 384 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 NUMBLQ9Y6R0 609 aa19.08■□□□□ 0.64
SHKBP1-204ENST00000594862 CLIC2O15247 247 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 RHOBTB3O94955 611 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 ZNF202O95125 648 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 DLATP10515 647 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 TNNI1P19237 187 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 PCSK1P29120 753 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 LHX1P48742 406 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 DUSP4Q13115 394 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 KCNB1Q14721 858 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 SLC39A12Q504Y0 691 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 PRSS36Q5K4E3 855 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 CXorf38Q8TB03 319 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 HPDLQ96IR7 371 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 CHAMP1Q96JM3 812 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 ACBD6Q9BR61 282 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 SLC2A4RGQ9NR83 387 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 SIX4Q9UIU6 781 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 KMT2EQ8IZD2 1858 aa19.07■□□□□ 0.64
SHKBP1-204ENST00000594862 ECI2O75521 394 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 NHLH1Q02575 133 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 DPYDQ12882 1025 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 SLC5A9Q2M3M2 681 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 PDCL2Q8N4E4 241 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 RDH13Q8NBN7 331 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 OR5B17Q8NGF7 314 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 RSAD2Q8WXG1 361 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 CEP72Q9P209 647 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 HOOK1Q9UJC3 728 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 L1RE1Q9UN81 338 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 PCDHB5Q9Y5E4 795 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 SNX9Q9Y5X1 595 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 NOTCH4Q99466 2003 aa19.06■□□□□ 0.64
SHKBP1-204ENST00000594862 PTPRJQ12913 1337 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 ZDBF2Q9HCK1 2354 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 USP34Q70CQ2 3546 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 CALUO43852 315 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 VNN2O95498 520 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 CEBPBP17676 345 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 CLCN5P51795 746 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 PFKPQ01813 784 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 TRAPPC11Q7Z392 1133 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 ADGRF2Q8IZF7 708 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 ATAD1Q8NBU5 361 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 ING5Q8WYH8 240 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 FGF14Q92915 247 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 PSMG2Q969U7 264 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 CCDC127Q96BQ5 260 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 RTP3Q9BQQ7 232 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 GTPBP4Q9BZE4 634 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 SMOC2Q9H3U7 446 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 GOLPH3LQ9H4A5 285 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 GDPD2Q9HCC8 539 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 ABCB6Q9NP58 842 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 RMND1Q9NWS8 449 aa19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 DDX43Q9NXZ2 648 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-204ENST00000594862 FAM163BP0C2L3 166 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 MYL4P12829 197 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 RFX1P22670 979 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 MRE11P49959 708 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 MGAT5BQ3V5L5 792 aa19.04■□□□□ 0.64
SHKBP1-204ENST00000594862 INTS6LQ5JSJ4 861 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms