RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 PPEF2O14830 753 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 SOAT2O75908 522 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 BMP15O95972 392 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 CHRNB1P11230 501 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 TYMPP19971 482 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 SCP2P22307 547 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 GABRR2P28476 465 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 SOX9P48436 509 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 FCHO2Q0JRZ9 810 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 SPEM2Q0P670 501 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 MYBPC2Q14324 1141 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 SF3A1Q15459 793 aaKnown RBP15.97■□□□□ 0.15
PNKP-202ENST00000593706 ZBTB6Q15916 424 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 JADE1Q6IE81 842 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 CENPPQ6IPU0 288 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 MAMSTRQ6ZN01 415 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 GPIHBP1Q8IV16 184 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 ARID3BQ8IVW6 561 aaPredicted RBP15.97■□□□□ 0.15
PNKP-202ENST00000593706 MYCT1Q8N699 235 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 TTC9BQ8N6N2 239 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 ATAD1Q8NBU5 361 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 PSMG2Q969U7 264 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 SENP8Q96LD8 212 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 AK8Q96MA6 479 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 GCNAQ96QF7 691 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 TSPAN18Q96SJ8 248 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 SEPT5Q99719 369 aaPredicted RBP15.97■□□□□ 0.15
PNKP-202ENST00000593706 LRRC3Q9BY71 257 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 ATXN3LQ9H3M9 355 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 C8orf33Q9H7E9 229 aaPredicted RBP15.97■□□□□ 0.15
PNKP-202ENST00000593706 PARVGQ9HBI0 331 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 TBX20Q9UMR3 447 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 ASB3Q9Y575 518 aa15.97■□□□□ 0.15
PNKP-202ENST00000593706 SPECC1L-ADORA2AF8WAN1 911 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 SLC26A4O43511 780 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 FAM189A1O60320 539 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 TBCAO75347 108 aaKnown RBP15.96■□□□□ 0.15
PNKP-202ENST00000593706 UBA7P41226 1012 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 ATXN1P54253 815 aaKnown RBP15.96■□□□□ 0.15
PNKP-202ENST00000593706 MLLT6P55198 1093 aaPredicted RBP15.96■□□□□ 0.15
PNKP-202ENST00000593706 LILRA4P59901 499 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 TMEM132DQ14C87 1099 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 VEPH1Q14D04 833 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 ARHGAP29Q52LW3 1261 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 ARSHQ5FYA8 562 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 GPR158Q5T848 1215 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 SPATA1Q5VX52 437 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.96■□□□□ 0.15
PNKP-202ENST00000593706 SPEM1Q8N4L4 309 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 CELF5Q8N6W0 485 aaKnown RBP15.96■□□□□ 0.15
PNKP-202ENST00000593706 TTC8Q8TAM2 541 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 TMEM209Q96SK2 561 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 PARD6AQ9NPB6 346 aa15.96■□□□□ 0.15
PNKP-202ENST00000593706 RBM12Q9NTZ6 932 aaKnown RBP15.96■□□□□ 0.15
PNKP-202ENST00000593706 CHURC1-FNTBB4DL54 471 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 PIGRP01833 764 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 NFICP08651 508 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 CTHP32929 405 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 FNTBP49356 437 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 SIM2Q14190 667 aaPredicted RBP15.95■□□□□ 0.14
PNKP-202ENST00000593706 TAF12Q16514 161 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 SLC39A12Q504Y0 691 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 C9orf57Q5W0N0 161 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 Q6ZS52 159 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 GAREM2Q75VX8 874 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 DNAJB7Q7Z6W7 309 aaPredicted RBP15.95■□□□□ 0.14
PNKP-202ENST00000593706 RALGPS2Q86X27 583 aaPredicted RBP15.95■□□□□ 0.14
PNKP-202ENST00000593706 CD302Q8IX05 232 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 ZFYVE19Q96K21 471 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 RTKNQ9BST9 563 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 CLIC4Q9Y696 253 aa15.95■□□□□ 0.14
PNKP-202ENST00000593706 MORC2Q9Y6X9 1032 aaPredicted RBP15.95■□□□□ 0.14
PNKP-202ENST00000593706 NUP205Q92621 2012 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 A0A0B4J269 797 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 TRAK2O60296 914 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 PAX3P23760 479 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 ABCD1P33897 745 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 LONP1P36776 959 aaKnown RBP15.94■□□□□ 0.14
PNKP-202ENST00000593706 CDR1P51861 262 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 CYP4F8P98187 520 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 GAS6Q14393 721 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 PON2Q15165 354 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 MGAT5BQ3V5L5 792 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 DGKKQ5KSL6 1271 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 HEATR6Q6AI08 1181 aaKnown RBP15.94■□□□□ 0.14
PNKP-202ENST00000593706 FAM173BQ6P4H8 233 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 METTL23Q86XA0 190 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 OR10T2Q8NGX3 314 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 LPIN3Q9BQK8 851 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 BLOC1S4Q9NUP1 217 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 GTSE1Q9NYZ3 720 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 HSFX1Q9UBD0 423 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 FBXO2Q9UK22 296 aaPredicted RBP15.94■□□□□ 0.14
PNKP-202ENST00000593706 CPSF3Q9UKF6 684 aaKnown RBP15.94■□□□□ 0.14
PNKP-202ENST00000593706 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.94■□□□□ 0.14
PNKP-202ENST00000593706 PTPRDP23468 1912 aa15.94■□□□□ 0.14
PNKP-202ENST00000593706 MYBPHLA2RUH7 354 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 DCDC2BA2VCK2 349 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 LRP3O75074 770 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 PRAMEF12O95522 483 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms