RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 WDR87Q6ZQQ6 2873 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 OBSL1O75147 1896 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 ANO9A1A5B4 782 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 ANKRD63C9JTQ0 380 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 SLC26A4O43511 780 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 PRAMEF12O95522 483 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 ATF6P18850 670 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 PLCG1P19174 1290 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 NMT1P30419 496 aaKnown RBP17.72■□□□□ 0.43
LIG1-205ENST00000593425 UBA7P41226 1012 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 CXCL12P48061 93 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 KPNA1P52294 538 aaPredicted RBP17.72■□□□□ 0.43
LIG1-205ENST00000593425 CYP4F8P98187 520 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 LMNB2Q03252 620 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 TMEM132DQ14C87 1099 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 KARSQ15046 597 aaKnown RBP17.72■□□□□ 0.43
LIG1-205ENST00000593425 GPR158Q5T848 1215 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 ARMCX5Q6P1M9 558 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 CD302Q8IX05 232 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 RAD54LQ92698 747 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 ZHX3Q9H4I2 956 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 C8orf33Q9H7E9 229 aaPredicted RBP17.72■□□□□ 0.43
LIG1-205ENST00000593425 GTSE1Q9NYZ3 720 aa17.72■□□□□ 0.43
LIG1-205ENST00000593425 DENND4CQ5VZ89 1909 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 MYBPHLA2RUH7 354 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 SPECC1L-ADORA2AF8WAN1 911 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 CYP11A1P05108 521 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 KRT18P05783 430 aaKnown RBP17.71■□□□□ 0.43
LIG1-205ENST00000593425 HOXC13P31276 330 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 CTHP32929 405 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 ACOT2P49753 483 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 GTF2BQ00403 316 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 SPEM2Q0P670 501 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 SRSF5Q13243 272 aaKnown RBP17.71■□□□□ 0.43
LIG1-205ENST00000593425 LRRC32Q14392 662 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 SLC39A12Q504Y0 691 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 ZC2HC1CQ53FD0 456 aaPredicted RBP17.71■□□□□ 0.43
LIG1-205ENST00000593425 PRR23BQ6ZRT6 265 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 SPEM1Q8N4L4 309 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 SEPT5Q99719 369 aaPredicted RBP17.71■□□□□ 0.43
LIG1-205ENST00000593425 ZCWPW1Q9H0M4 648 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 IL21Q9HBE4 155 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 C2orf42Q9NWW7 574 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 HSFX1Q9UBD0 423 aa17.71■□□□□ 0.43
LIG1-205ENST00000593425 CDV3Q9UKY7 258 aaKnown RBP17.71■□□□□ 0.43
LIG1-205ENST00000593425 PRR5-ARHGAP8B1AHC4 643 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 CHURC1-FNTBB4DL54 471 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 K7ESF4 209 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 SCP2P22307 547 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 FNTBP49356 437 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 ARHGAP8P85298 464 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 MGAT5BQ3V5L5 792 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 ARHGAP29Q52LW3 1261 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 LAIR1Q6GTX8 287 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 C1orf228Q6PIY5 440 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 ITIH5Q86UX2 942 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 CELF5Q8N6W0 485 aaKnown RBP17.7■□□□□ 0.42
LIG1-205ENST00000593425 FAM200AQ8TCP9 573 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 IKZF4Q9H2S9 585 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 OBP2AQ9NY56 170 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 RAB23Q9ULC3 237 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 DERAQ9Y315 318 aa17.7■□□□□ 0.42
LIG1-205ENST00000593425 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.7■□□□□ 0.42
LIG1-205ENST00000593425 DPYSL4O14531 572 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 HRO43593 1189 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 TBCAO75347 108 aaKnown RBP17.69■□□□□ 0.42
LIG1-205ENST00000593425 FGF19O95750 216 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 SDHBP21912 280 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 PAX3P23760 479 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 TNK2Q07912 1038 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 PON2Q15165 354 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 ARHGAP15Q53QZ3 475 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 ADALQ6DHV7 355 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 LRRTM3Q86VH5 581 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 RALGPS2Q86X27 583 aaPredicted RBP17.69■□□□□ 0.42
LIG1-205ENST00000593425 RASSF8Q8NHQ8 419 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 BPIFB1Q8TDL5 484 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 LARP4BQ92615 738 aaKnown RBP17.69■□□□□ 0.42
LIG1-205ENST00000593425 PYM1Q9BRP8 204 aaKnown RBP17.69■□□□□ 0.42
LIG1-205ENST00000593425 SMG9Q9H0W8 520 aaKnown RBP17.69■□□□□ 0.42
LIG1-205ENST00000593425 ASB7Q9H672 318 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 TASP1Q9H6P5 420 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 C2CD2Q9Y426 696 aa17.69■□□□□ 0.42
LIG1-205ENST00000593425 DCDC2BA2VCK2 349 aa17.68■□□□□ 0.42
LIG1-205ENST00000593425 CYB561D2O14569 222 aa17.68■□□□□ 0.42
LIG1-205ENST00000593425 PAPSS2O95340 614 aaPredicted RBP17.68■□□□□ 0.42
LIG1-205ENST00000593425 LONP1P36776 959 aaKnown RBP17.68■□□□□ 0.42
LIG1-205ENST00000593425 TUFMP49411 452 aaKnown RBP17.68■□□□□ 0.42
LIG1-205ENST00000593425 TAF6P49848 677 aa17.68■□□□□ 0.42
LIG1-205ENST00000593425 SIM2Q14190 667 aaPredicted RBP17.68■□□□□ 0.42
LIG1-205ENST00000593425 HEATR6Q6AI08 1181 aaKnown RBP17.68■□□□□ 0.42
LIG1-205ENST00000593425 CRELD2Q6UXH1 353 aaPredicted RBP17.68■□□□□ 0.42
LIG1-205ENST00000593425 EFCAB13Q8IY85 973 aa17.68■□□□□ 0.42
LIG1-205ENST00000593425 GIPC2Q8TF65 315 aa17.68■□□□□ 0.42
LIG1-205ENST00000593425 RTKNQ9BST9 563 aa17.68■□□□□ 0.42
LIG1-205ENST00000593425 DPP3Q9NY33 737 aa17.68■□□□□ 0.42
LIG1-205ENST00000593425 AGO2Q9UKV8 859 aaKnown RBP17.68■□□□□ 0.42
LIG1-205ENST00000593425 DSEQ9UL01 958 aa17.68■□□□□ 0.42
LIG1-205ENST00000593425 SMC3Q9UQE7 1217 aa17.68■□□□□ 0.42
LIG1-205ENST00000593425 STYXL1Q9Y6J8 313 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms